RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GABRR3A8MPY1 467 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 LYRM9A8MSI8 78 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 HAT1O14929 419 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 NPIPB7O75200 414 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 FCN3O75636 299 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 LY6G6DO95868 133 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 C6orf47O95873 294 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 HLA-HP01893 362 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 FUT3P21217 361 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 AK4P27144 223 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 SLC26A3P40879 764 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 TNFSF9P41273 254 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 CAV2P51636 162 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 NUP107P57740 925 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 NUTF2P61970 127 aaKnown RBP3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 LTBP1Q14766 1721 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 OTPQ5XKR4 325 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 VTCN1Q7Z7D3 282 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR2L5Q8NG80 312 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR52E5Q8NH55 327 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR5K2Q8NHB8 316 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 GEMIN6Q8WXD5 167 aaKnown RBP3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 MYDGFQ969H8 173 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 DNAJC1Q96KC8 554 aaKnown RBP3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 SERPINB12Q96P63 405 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 ECSITQ9BQ95 431 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 SLC7A5P2Q9GIP4 190 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 IL22Q9GZX6 179 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 CLMPQ9H6B4 373 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 PLSCR3Q9NRY6 295 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 SAR1BQ9Y6B6 198 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 CASP8AP2Q9UKL3 1982 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 COL4A5P29400 1685 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 PSME4Q14997 1843 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SPEF2Q9C093 1822 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 A0A1W2PRD5 423 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 TMEM120BA0PK00 339 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 H7C0C1 242 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZNF701M0R085 212 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SCAMP2O15127 329 aaKnown RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 DPM1O60762 260 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 KLF8O95600 359 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 AIFM1O95831 613 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 IFNW1P05000 195 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CRYGCP07315 174 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CTRB1P17538 263 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CPN2P22792 545 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SH3BGRP55822 239 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CARD18P57730 90 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 LYZP61626 148 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SP4Q02446 784 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 REG3AQ06141 175 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 NCF4Q15080 339 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 PSMD5Q16401 504 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 IL17AQ16552 155 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SGCAQ16586 387 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 KCTD19Q17RG1 926 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZNF630Q2M218 657 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZBED5Q49AG3 693 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 NKAIN1Q4KMZ8 207 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 COA6Q5JTJ3 125 aaKnown RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CCNJQ5T5M9 372 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 FRMPD2BQ6IN97 320 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 TMEM179Q6ZVK1 233 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 H2AFVQ71UI9 128 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 TMEM150AQ86TG1 271 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 LINC00523Q86TU6 105 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 APRG1Q8IVJ8 170 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 PROKR2Q8NFJ6 384 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR56A4Q8NGH8 313 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 LINC01006Q8NI28 216 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 MCOLN3Q8TDD5 553 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 ACER1Q8TDN7 264 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 CERS2Q96G23 380 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 GABARAPL3Q9BY60 117 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 PIGUQ9H490 435 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 BEX1Q9HBH7 125 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 KCNJ16Q9NPI9 418 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 STOX2Q9P2F5 926 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 ABCC12Q96J65 1359 aa3.73□□□□□ -1.81
HMGB1P3-201ENST00000502802 SCN9AQ15858 1988 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 MAP3K15Q6ZN16 1313 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 UBN2Q6ZU65 1347 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 AKAP11Q9UKA4 1901 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 CENPFP49454 3210 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 SERPINE3A8MV23 424 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 HIDE1A8MVS5 230 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 FAM25EA8MYX2 175 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 PEX7O00628 323 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 XKRYO14609 159 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 BCKDKO14874 412 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 FKBP6O75344 327 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 SRP72O76094 671 aaKnown RBP3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 UTS2O95399 124 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 MOSP00540 346 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 CLTAP09496 248 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 IGHV3-43DP0DP04 118 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 CD1EP15812 388 aa3.72□□□□□ -1.81
HMGB1P3-201ENST00000502802 U2AF2P26368 475 aaKnown RBP eCLIP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms