RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FAM90A27PA6NNH2 459 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 J3QLW9 94 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 SYNGR3O43761 229 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 IGKV3-15P01624 115 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 HTR1AP08908 422 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF19P17023 458 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 JUNBP17275 347 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 STOMP27105 288 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 RPL5P46777 297 aaKnown RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 HTR5AP47898 357 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 CDH15P55291 814 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 GTF3C1Q12789 2109 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 MLLT11Q13015 90 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 MED22Q15528 200 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 TBC1D28Q2M2D7 210 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 CCDC92Q53HC0 331 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 LIPNQ5VXI9 398 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 FDX2Q6P4F2 183 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 RPL22L1Q6P5R6 122 aaKnown RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 TMEM154Q6P9G4 183 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 CFAP77Q6ZQR2 320 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 NCCRP1Q6ZVX7 275 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 KCTD8Q6ZWB6 473 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 WDR31Q8NA23 367 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 OR52H1Q8NGJ2 320 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 ITLN2Q8WWU7 325 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 THRSPQ92748 146 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 RGCCQ9H4X1 137 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 EIF3KQ9UBQ5 218 aaKnown RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 CLEC2DQ9UHP7 191 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 MRM2Q9UI43 246 aaKnown RBP9.63□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF391Q9UJN7 358 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 R4GMQ9 66 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 TMEM269A0A1B0GVZ9 245 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 ZG16O60844 167 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 AGFG2O95081 481 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 IGLV1-44P01699 117 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 CD1AP06126 327 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 EPXP11678 715 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 ATP6V1B1P15313 513 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 CFL1P23528 166 aaKnown RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 PSMA1P25786 263 aaKnown RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 OTX1P32242 354 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 CCR9P51686 369 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 HCCSP53701 268 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 OR12D2P58182 307 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 PSMA6P60900 246 aaKnown RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 PIGFQ07326 219 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 TAB1Q15750 504 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 TIGD6Q17RP2 521 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 KRTAP27-1Q3LI81 207 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SYT6Q5T7P8 510 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF774Q6NX45 483 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 TMEM108Q6UXF1 575 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 LRRN1Q6UXK5 716 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 MDP1Q86V88 176 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 CCDC54Q8NEL0 328 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SLC30A7Q8NEW0 376 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 OR5L1Q8NGL2 311 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SPRYD4Q8WW59 207 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 GATAD2BQ8WXI9 593 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 UFD1Q92890 307 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 RADILQ96JH8 1075 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 DACH2Q96NX9 599 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 MGLLQ99685 303 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 KCNS3Q9BQ31 491 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 MED18Q9BUE0 208 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 WNT5BQ9H1J7 359 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SLCO1C1Q9NYB5 712 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF224Q9NZL3 707 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 RALYQ9UKM9 306 aaKnown RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 KLHDC2Q9Y2U9 406 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SPEF1Q9Y4P9 236 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 LRP12Q9Y561 859 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 KLF2Q9Y5W3 355 aaPredicted RBP9.62□□□□□ -0.87
HDLBP-242ENST00000488013 SHANK1Q9Y566 2161 aa9.62□□□□□ -0.87
HDLBP-242ENST00000488013 MAST4O15021 2626 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
HDLBP-242ENST00000488013 WIPF3A6NGB9 483 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 TUBAL3A6NHL2 446 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 F5H5K5 113 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 LOC110117498-PIK3R3F6TDL0 507 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 J3QKU1 62 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 M0R135 149 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 CASKO14936 926 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 GPRIN2O60269 458 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 ICMTO60725 284 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 ABHD16AO95870 558 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF12P17014 697 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 PCMT1P22061 227 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 CRYGSP22914 178 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 PTAFRP25105 342 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 PCSK6P29122 969 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 RPS27P42677 84 aaKnown RBP9.61□□□□□ -0.87
HDLBP-242ENST00000488013 GALK2Q01415 458 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
HDLBP-242ENST00000488013 DBPQ10586 325 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms