RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 DBTP11182 482 aaKnown RBP16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 WNT5AP41221 380 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 SLC15A1P46059 708 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 HCCSP53701 268 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 KRTAP10-9P60411 292 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 CDK5R2Q13319 367 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 SNCBQ16143 134 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 KRT80Q6KB66 452 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 KCTD18Q6PI47 426 aaPredicted RBP16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 DEGS2Q6QHC5 323 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 OR2T27Q8NH04 317 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 SMAP2Q8WU79 429 aaPredicted RBP16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 ASB17Q8WXJ9 295 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 SLC7A6Q92536 515 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 SPTSSAQ969W0 71 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 ELOVL3Q9HB03 270 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 CA10Q9NS85 328 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 CENPMQ9NSP4 180 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 RAB26Q9ULW5 256 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 RPL36Q9Y3U8 105 aaKnown RBP16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 PCDHGB1Q9Y5G3 927 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 VSTM5A8MXK1 200 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 J3QRE1 110 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 J3QW42 95 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 DBHP09172 617 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 TUBG1P23258 451 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 APOBEC3AP31941 199 aaPredicted RBP16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 ATP6V1E1P36543 226 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 OPRL1P41146 370 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 RGS6P49758 472 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 TPTEP56180 551 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 GRB2P62993 217 aaKnown RBP16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF91Q05481 1191 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 SNTB2Q13425 540 aaKnown RBP16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 C20orf204Q6ZNR8 217 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 CNIH3Q8TBE1 160 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 ANKRD60Q9BZ19 345 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 TUBG2Q9NRH3 451 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 COPS3Q9UNS2 423 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 KLHDC2Q9Y2U9 406 aa16.71■□□□□ 0.27
PCOLCE-208ENST00000487172 NBPF19A0A087WUL8 3843 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF670-ZNF695F2Z2N8 137 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 F5H5K5 113 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 SMPD2O60906 423 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 APOC1P02654 83 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 ACSM4P0C7M7 580 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 MYF6P23409 242 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 TTKP33981 857 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 RPS23P62266 143 aaKnown RBP16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 ROM1Q03395 351 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 RAB40BQ12829 278 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 TAF13Q15543 124 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 KLHL22Q53GT1 634 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 COLCA1Q6ZS62 124 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF101Q8IZC7 436 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 TMEM171Q8WVE6 324 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 LGALS12Q96DT0 336 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF184Q99676 751 aaPredicted RBP16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 COPS4Q9BT78 406 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 NIPAL2Q9H841 368 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 UBTD1Q9HAC8 227 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 AMBNQ9NP70 447 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 GRIP1Q9Y3R0 1128 aa16.7■□□□□ 0.26
PCOLCE-208ENST00000487172 M0R135 149 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF254O75437 659 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ABHD16AO95870 558 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 H2BFMP0C1H6 154 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 DANCRP0C864 163 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 FAM157BP0CG42 384 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 DCTDP32321 178 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 THBS4P35443 961 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 CXCR4P61073 352 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ACTC1P68032 377 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ACTA1P68133 377 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 EGR3Q06889 387 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 SMN1Q16637 294 aaKnown RBP16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF322Q6U7Q0 402 aaPredicted RBP16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 DRAM2Q6UX65 266 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF679Q8IYX0 411 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 APOBEC3DQ96AK3 386 aaPredicted RBP16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 ZNF799Q96GE5 643 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 COG8Q96MW5 612 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 OR8B4Q96RC9 309 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 C1QTNF5Q9BXJ0 243 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 PLCXD1Q9NUJ7 323 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 FAIMQ9NVQ4 179 aa16.69■□□□□ 0.26
PCOLCE-208ENST00000487172 HECTD1Q9ULT8 2610 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 GPRIN2O60269 458 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 APOL3O95236 402 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 NGFP01138 241 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 FABP6P51161 128 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 ADIPOQQ15848 244 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 LAIR2Q6ISS4 152 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 SPATC1Q76KD6 591 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 KRT77Q7Z794 578 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 FBXL14Q8N1E6 418 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 OR10H4Q8NGA5 316 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 OR1J1Q8NGS3 322 aa16.68■□□□□ 0.26
PCOLCE-208ENST00000487172 LURAP1Q96LR2 239 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms