RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 C16orf45Q96MC5 204 aaPredicted RBP6.31□□□□□ -1.4
PDPN-205ENST00000487038 ALG12Q9BV10 488 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 SLC7A7Q9UM01 511 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 FOXJ3Q9UPW0 622 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 CORO2BQ9UQ03 480 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 KPTNQ9Y664 436 aa6.31□□□□□ -1.4
PDPN-205ENST00000487038 TRAV38-1A0A0B4J264 116 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 WDR91A4D1P6 747 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TRAPPC13A5PLN9 417 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 F5H5P2 479 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 M0R3H8 397 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 FBP2O00757 339 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 SDHDO14521 159 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 BIRC5O15392 142 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 MLNRO43193 412 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 ADAM20O43506 726 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 SGCEO43556 437 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TPST2O60704 377 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 FPR3P25089 353 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 AQP1P29972 269 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 ETV4P43268 484 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 KIR2DS4P43632 304 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 ERFP50548 548 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 POLR2JP52435 117 aaKnown RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 RAD23AP54725 363 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 ARF6P62330 175 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 IFFO1Q0D2I5 559 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 NPTX1Q15818 432 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 CDONQ4KMG0 1287 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 FAM201AQ5SY85 155 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 ARMC4Q5T2S8 1044 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 NXNQ6DKJ4 435 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 OR2T2Q6IF00 324 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 SLC25A47Q6Q0C1 308 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 METAP1DQ6UB28 335 aaPredicted RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 FBXW12Q6X9E4 464 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 C1orf122Q6ZSJ8 110 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 FOXL2NBQ6ZUU3 175 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 C17orf53Q8N3J3 647 aaPredicted RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 PIP4P2Q8N4L2 257 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 PCYOX1LQ8NBM8 494 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 BHLHE23Q8NDY6 225 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 Q8TCH9 128 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 HDAC2Q92769 488 aaKnown RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 SORT1Q99523 831 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 FAM234AQ9H0X4 552 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TXNIPQ9H3M7 391 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TMEM38AQ9H6F2 299 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TMEM100Q9NV29 134 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 PTTG3PQ9NZH4 202 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 HAO1Q9UJM8 370 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 TMCC3Q9ULS5 477 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 STARD10Q9Y365 291 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 NOP16Q9Y3C1 178 aaKnown RBP6.3□□□□□ -1.4
PDPN-205ENST00000487038 LYSTQ99698 3801 aa6.3□□□□□ -1.4
PDPN-205ENST00000487038 IGKV1D-43A0A0B4J1Z2 117 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 IGHV3-64DA0A0J9YX35 117 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 IQCF6A8MYZ5 107 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 K7EIL1 84 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 NPFFO15130 113 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 TYROBPO43914 113 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 SHOX2O60902 331 aaPredicted RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 OR7A10O76100 309 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 IGF2P01344 180 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 MT-ND1P03886 318 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 FUT1P19526 365 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 CD247P20963 164 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 AQP2P41181 271 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 COL10A1Q03692 680 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 TOP3AQ13472 1001 aaPredicted RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 AQP6Q13520 282 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 ENDOGQ14249 297 aaKnown RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 OR8B8Q15620 311 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 ALG10Q5BKT4 473 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 CCBE1Q6UXH8 406 aaPredicted RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 BTN2A1Q7KYR7 527 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 EIF1ADQ8N9N8 165 aaKnown RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 SMYD1Q8NB12 490 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 C19orf18Q8NEA5 215 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 ST8SIA4Q92187 359 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 GTF2H4Q92759 462 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 APOBEC3DQ96AK3 386 aaPredicted RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 NMD3Q96D46 503 aaKnown RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 ITPKCQ96DU7 683 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 DMRTB1Q96MA1 342 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 B9D2Q9BPU9 175 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 HCAR1Q9BXC0 346 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 C20orf27Q9GZN8 174 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 NPFFR1Q9GZQ6 430 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 PAIP1Q9H074 479 aaKnown RBP6.29□□□□□ -1.4
PDPN-205ENST00000487038 MMP28Q9H239 520 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 SEMA6AQ9H2E6 1030 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 POLE4Q9NR33 117 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms