RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 HPS1Q92902 700 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CMBLQ96DG6 245 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 SAP30LQ9HAJ7 183 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 MRPL22Q9NWU5 206 aaKnown RBP10.97□□□□□ -0.65
HDAC1-209ENST00000484305 ATPIF1Q9UII2 106 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CACNG2Q9Y698 323 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CUBNO60494 3623 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 DHRS12A0PJE2 317 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 AQP12BA6NM10 295 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 TIMM8AO60220 97 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-209ENST00000484305 HLA-DQA2P01906 255 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 TUBG1P23258 451 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 PYCR1P32322 319 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 GGT2P36268 569 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 LIPAP38571 399 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 ERFP50548 548 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 HLXQ14774 488 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-209ENST00000484305 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 DNAL1Q4LDG9 190 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 FAM209AQ5JX71 171 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 SLC18B1Q6NT16 456 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 AQP12AQ8IXF9 295 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 OR10G2Q8NGC3 310 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 OR4Q3Q8NH05 313 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 GIPC3Q8TF64 312 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 FEVQ99581 238 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 COQ7Q99807 217 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 NIPSNAP1Q9BPW8 284 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 CDADC1Q9BWV3 514 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 BEX2Q9BXY8 128 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 SHARPINQ9H0F6 387 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 HDHD2Q9H0R4 259 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 CYSLTR2Q9NS75 346 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 ARMC1Q9NVT9 282 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 TREM2Q9NZC2 230 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 CYB5R1Q9UHQ9 305 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 PURGQ9UJV8 347 aaKnown RBP10.96□□□□□ -0.65
HDAC1-209ENST00000484305 CDC42EP3Q9UKI2 254 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 KCNS2Q9ULS6 477 aa10.96□□□□□ -0.65
HDAC1-209ENST00000484305 DYSFO75923 2080 aa10.96□□□□□ -0.66
HDAC1-209ENST00000484305 TVP23AA6NH52 213 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 DNAJC8O75937 253 aaPredicted RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 ADH4P08319 380 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 PSKH1P11801 424 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 KITLGP21583 273 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 RPS27P42677 84 aaKnown RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 HNRNPA0Q13151 305 aaKnown RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 FLOT2Q14254 428 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 AVPI1Q5T686 147 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 LYPD4Q6UWN0 246 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 CD300LDQ6UXZ3 194 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 Q6ZR03 302 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 IL17RELQ6ZVW7 336 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 SPATA24Q86W54 205 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 LINC01356Q8N9X3 169 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 PROKR2Q8NFJ6 384 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 OR51L1Q8NGJ5 315 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 OR9Q1Q8NGQ5 310 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 OR2AJ1Q8NGZ0 328 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 PTP4A1Q93096 173 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 HAVCR1Q96D42 359 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 COG8Q96MW5 612 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 RBM4Q9BWF3 364 aaKnown RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 PNRC2Q9NPJ4 139 aaKnown RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 PTTG3PQ9NZH4 202 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 CGGBP1Q9UFW8 167 aaPredicted RBP10.95□□□□□ -0.66
HDAC1-209ENST00000484305 ZDHHC8Q9ULC8 765 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 POMPQ9Y244 141 aa10.95□□□□□ -0.66
HDAC1-209ENST00000484305 TCRBV3S1A0A5B6 114 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 FAM157AC9JC47 383 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 J3QW42 95 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 GNGT2O14610 69 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 GSC2O15499 205 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 GYPBP06028 91 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 CD55P08174 381 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 FAM157CP0CG43 387 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 RAC2P15153 192 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 RBMXP38159 391 aaKnown RBP10.94□□□□□ -0.66
HDAC1-209ENST00000484305 RGS6P49758 472 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 CDH15P55291 814 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 LMO4P61968 165 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 TNFAIP6P98066 277 aaPredicted RBP10.94□□□□□ -0.66
HDAC1-209ENST00000484305 MVKQ03426 396 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 BNIP1Q12981 228 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 CRMP1Q14194 572 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 GK3PQ14409 553 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 HFEQ30201 348 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 KRTAP27-1Q3LI81 207 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 ZMAT1Q5H9K5 638 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 NAA40Q86UY6 237 aa10.94□□□□□ -0.66
HDAC1-209ENST00000484305 OR2T33Q8NG76 320 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms