RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 H0YIG0 161 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 ZNF749O43361 778 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 CRTAPO75718 401 aaPredicted RBP11.44□□□□□ -0.58
VPS52-218ENST00000482399 OR2F2O95006 317 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 GP1BAP07359 652 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 ZNF14P17017 642 aaPredicted RBP11.44□□□□□ -0.58
VPS52-218ENST00000482399 MST1P26927 711 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 OR2F1Q13607 317 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 OR8B4Q96RC9 309 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 ICAM5Q9UMF0 924 aa11.44□□□□□ -0.58
VPS52-218ENST00000482399 TEX13DA0A0J9YY54 714 aaPredicted RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 TMEM218A2RU14 115 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 CPED1A4D0V7 1026 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 SHISA8B8ZZ34 492 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 PSMB6P28072 239 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 SRSF3P84103 164 aaKnown RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 FHL1Q13642 323 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 PEA15Q15121 130 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 CSRP2Q16527 193 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 CDC20BQ86Y33 519 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 LDLRAD3Q86YD5 345 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 C14orf79Q96F83 325 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 LCORQ96JN0 433 aaPredicted RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 EIF5A2Q9GZV4 153 aaKnown RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 SFXN1Q9H9B4 322 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 OR52A1Q9UKL2 312 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 GNRH1P01148 92 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 THEGLP0DJG4 465 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 VEGFBP49765 207 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 GGTLC2Q14390 218 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 FAM109BQ6ICB4 259 aaPredicted RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 KLK13Q9UKR3 277 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 ZNF205O95201 554 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 SPP1P10451 314 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 HLA-DOBP13765 273 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 VWA2Q5GFL6 755 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 LY6G6FQ5SQ64 297 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 ZNF704Q6ZNC4 412 aaPredicted RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 PEG10Q86TG7 708 aaKnown RBP11.43□□□□□ -0.58
VPS52-218ENST00000482399 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 GPX8Q8TED1 209 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 PTGES2Q9H7Z7 377 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 HIF3AQ9Y2N7 669 aa11.43□□□□□ -0.58
VPS52-218ENST00000482399 TRIOO75962 3097 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 A0A0A6YYH2 397 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 PRSS37A4D1T9 235 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 A6NJ64 397 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 PLRG1O43660 514 aaKnown RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 DAOP14920 347 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 NPBWR1P48145 328 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 JMJD6Q6NYC1 403 aaPredicted RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 LYG2Q86SG7 212 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 KCNRGQ8N5I3 272 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 C19orf47Q8N9M1 422 aaKnown RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 POLE3Q9NRF9 147 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 RHBDD3Q9Y3P4 386 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 SNAPC5O75971 98 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 SNAPINO95295 136 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 RORAP35398 523 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 ID4P47928 161 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 IL10RAQ13651 578 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 RTN4RL2Q86UN3 420 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 CSNK2A3Q8NEV1 391 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 LMX1AQ8TE12 382 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 TM4SF19Q96DZ7 209 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 ZCCHC4Q9H5U6 513 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 COPS7AQ9UBW8 275 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 KLF15Q9UIH9 416 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
VPS52-218ENST00000482399 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 CCDC163A0A0D9SF12 145 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 LOC101059948A0A1B0GTJ6 334 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 C9orf170A2RU37 121 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 GFERP55789 205 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 OR2B8PP59922 312 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 TGIF1Q15583 401 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 C7orf61Q8IZ16 206 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 ZNF426Q9BUY5 554 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 NUDT9Q9BW91 350 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 TPSD1Q9BZJ3 242 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms