RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 PTBP3O95758 552 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CD8AP01732 235 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 LYNP07948 512 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 PIPP12273 146 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ANPEPP15144 967 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SELEP16581 610 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 PRKACGP22612 351 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 GIFP27352 417 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 GSTT1P30711 240 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CALCRP30988 508 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CDAP32320 146 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 OPRL1P41146 370 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 GATA4P43694 442 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 HSPA13P48723 471 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF83P51522 516 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 TPTEP56180 551 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 KLF3P57682 345 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CXCR4P61073 352 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ISL1P61371 349 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ADAM8P78325 824 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ELF3P78545 371 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SLC34A1Q06495 639 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SNTB2Q13425 540 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 TSC22D1Q15714 1073 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SNAPC1Q16533 368 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SGCAQ16586 387 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF181Q2M3W8 571 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 C11orf91Q3C1V1 193 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CCDC92Q53HC0 331 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZBTB37Q5TC79 503 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 RNLSQ5VYX0 342 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 FBXW10Q5XX13 1052 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ANKRD34AQ69YU3 496 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 USP51Q70EK9 711 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 MEPCEQ7L2J0 689 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CXXC5Q7LFL8 322 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 AMIGO2Q86SJ2 522 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF679Q8IYX0 411 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 HS3ST5Q8IZT8 346 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 FTMTQ8N4E7 242 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CBR4Q8N4T8 237 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF540Q8NDQ6 660 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 KBTBD8Q8NFY9 601 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 RHOXF1Q8NHV9 184 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 FBLIM1Q8WUP2 373 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ERGIC1Q969X5 290 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 C10orf35Q96D05 121 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 MRPL48Q96GC5 212 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 MARS2Q96GW9 593 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ZC3HAV1LQ96H79 300 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 C4orf45Q96LM5 186 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CNN2Q99439 309 aaKnown RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 DOK1Q99704 481 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 KCNJ15Q99712 375 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CCL19Q99731 98 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SH3GL3Q99963 347 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CDADC1Q9BWV3 514 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 RNF121Q9H920 327 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 WDR76Q9H967 626 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 SEC61A2Q9H9S3 476 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 CLN6Q9NWW5 311 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 PLEK2Q9NYT0 353 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 IL20RAQ9UHF4 553 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 GDF2Q9UK05 429 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-223ENST00000480525 ACANP16112 2415 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 MTORP42345 2549 aa4.38□□□□□ -1.71
HDAC6-223ENST00000480525 LOC100130705A0A1B0GUX0 176 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 TMEM129A0AVI4 362 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 CCDC182A6NF36 153 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 FAM171A2A8MVW0 826 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 IQCF6A8MYZ5 107 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 H7C1C5 153 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 M0R135 149 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 M0R233 179 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 RER1O15258 196 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 PRKYO43930 277 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 ABHD16AO95870 558 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 F12P00748 615 aaPredicted RBP4.37□□□□□ -1.71
HDAC6-223ENST00000480525 IGLV3-1P01715 115 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 IGHA1P01876 353 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 SOD3P08294 240 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 SBK2P0C263 348 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 OR4A8P0C604 315 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 ACSM4P0C7M7 580 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 SLC25A16P16260 332 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 EPHA2P29317 976 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 WNT5AP41221 380 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 HTR5AP47898 357 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 PTH2RP49190 550 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 MMP15P51511 669 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 EFNA4P52798 201 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 PSMA6P60900 246 aaKnown RBP4.37□□□□□ -1.71
HDAC6-223ENST00000480525 LCN6P62502 163 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 ACTA2P62736 377 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 ACTG2P63267 376 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 MZT1Q08AG7 82 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 RAB40BQ12829 278 aa4.37□□□□□ -1.71
HDAC6-223ENST00000480525 PPP1R8Q12972 351 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms