RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 POLR3GO15318 223 aaPredicted RBP13.35□□□□□ -0.27
DDX56-210ENST00000479440 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 IER3P46695 156 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 RAP1BP61224 184 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 RAP1AP62834 184 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 KCNJ8Q15842 424 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 FAM189A2Q15884 450 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 FUNDC1Q8IVP5 155 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 PNLDC1Q8NA58 520 aaKnown RBP13.35□□□□□ -0.27
DDX56-210ENST00000479440 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 OR11L1Q8NGX0 322 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 RASD2Q96D21 266 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 WDFY2Q96P53 400 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 POLR2J2Q9GZM3 115 aaKnown RBP13.35□□□□□ -0.27
DDX56-210ENST00000479440 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
DDX56-210ENST00000479440 MMADHCQ9H3L0 296 aaPredicted RBP13.35□□□□□ -0.27
DDX56-210ENST00000479440 ERVK-18Q9QC07 812 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 MED31Q9Y3C7 131 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 OPN1MWP04001 364 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 AQP6Q13520 282 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 FAM201AQ5SY85 155 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 INTS11Q5TA45 600 aaKnown RBP13.34□□□□□ -0.27
DDX56-210ENST00000479440 OR2T2Q6IF00 324 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 LYPD2Q6UXB3 125 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 ZNF841Q6ZN19 808 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 NKAIN4Q8IVV8 208 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 MREGQ8N565 214 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 LHX4Q969G2 390 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 ERGIC1Q969X5 290 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 EMC7Q9NPA0 242 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 USH1CQ9Y6N9 552 aa13.34□□□□□ -0.27
DDX56-210ENST00000479440 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 F5H5P2 479 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 MLNRO43193 412 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 OR5F1O95221 314 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 PSMB10P40306 273 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 GATA4P43694 442 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 WDR4P57081 412 aaKnown RBP13.33□□□□□ -0.28
DDX56-210ENST00000479440 EGR3Q06889 387 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 LAPTM4AQ15012 233 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 TNFAIP8L3Q5GJ75 292 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 Q6ZTK2 550 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 GALNT4Q8N4A0 578 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 Q8TCH9 128 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 ATPIF1Q9UII2 106 aa13.33□□□□□ -0.28
DDX56-210ENST00000479440 CAB39Q9Y376 341 aaPredicted RBP13.33□□□□□ -0.28
DDX56-210ENST00000479440 TMEM120BA0PK00 339 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 ELOVL7A1L3X0 281 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 TSPAN9O75954 239 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 PRB2P02812 416 aaPredicted RBP13.32□□□□□ -0.28
DDX56-210ENST00000479440 FUT4P22083 530 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 CTXN1P60606 82 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 IGFN1Q86VF2 1251 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 CELF2-AS1Q8N7Q2 184 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 PPP1R14AQ96A00 147 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 VPREB3Q9UKI3 123 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 FAM96BQ9Y3D0 163 aa13.32□□□□□ -0.28
DDX56-210ENST00000479440 KMT2CQ8NEZ4 4911 aaKnown RBP13.32□□□□□ -0.28
DDX56-210ENST00000479440 TET2Q6N021 2002 aaPredicted RBP13.31□□□□□ -0.28
DDX56-210ENST00000479440 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 HTR3EA5X5Y0 456 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 OR6C6A6NF89 314 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 SCG5P05408 212 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 FPR3P25089 353 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 MTPNP58546 118 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 HERPUD1Q15011 391 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 DLEU7Q6UYE1 221 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 CROCCP2Q86T23 111 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 APOBEC3DQ96AK3 386 aaPredicted RBP13.31□□□□□ -0.28
DDX56-210ENST00000479440 SIRPDQ9H106 197 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 RIMS3Q9UJD0 308 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
DDX56-210ENST00000479440 H7C1C5 153 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 FBP2O00757 339 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 FAM20BO75063 409 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 FBP1P09467 338 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 TGFBR2P37173 567 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 PMELP40967 661 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 LOXL3P58215 753 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 LCN6P62502 163 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 AGKQ53H12 422 aa13.3□□□□□ -0.28
DDX56-210ENST00000479440 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms