RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TMEM244Q5VVB8 128 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3CQ6IPX1 549 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 FIP1L1Q6UN15 594 aaKnown RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3Q8IZP1 549 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 RHOVQ96L33 236 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 ELF4Q99607 663 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 WIPF3A6NGB9 483 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 MFNGO00587 321 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 YIF1AO95070 293 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 FCGR3AP08637 254 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SRSF5Q13243 272 aaKnown RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 MEF2DQ14814 521 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 PRICKLE4Q2TBC4 344 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SLC17A9Q9BYT1 436 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 WIF1Q9Y5W5 379 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 DUS4LO95620 317 aaKnown RBP12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PI3P19957 117 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PAX6P26367 422 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 GRK6P43250 576 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PRPS1P60891 318 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 RAB2AP61019 212 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 RPS4XP62701 263 aaKnown RBP12.35□□□□□ -0.43
NPHP4-207ENST00000470763 DEFA6Q01524 100 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 CSNK1A1LQ8N752 337 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 FRMD1Q8N878 549 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 FREM3P0C091 2139 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 TRBV23OR9-2A0A075B6M9 112 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 AP4M1O00189 453 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 DLL1O00548 723 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
NPHP4-207ENST00000470763 OIP5O43482 229 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PMP2P02689 132 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 PSG6Q00889 435 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 DHCR24Q15392 516 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 TMEM52BQ4KMG9 183 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 MESTQ5EB52 335 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 Q6ZRG5 221 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 MDGA2Q7Z553 956 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 RELTQ969Z4 430 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 NUDT9Q9BW91 350 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 RAB11FIP5Q9BXF6 653 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 COL25A1Q9BXS0 654 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-207ENST00000470763 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
NPHP4-207ENST00000470763 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 A0A1B0GV90 55 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 METTL21EPA6NDL7 271 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 CISD3P0C7P0 127 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 GLP1RP43220 463 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 MFGE8Q08431 387 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 GPR18Q14330 331 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 HNRNPA1L2Q32P51 320 aaKnown RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 RCBTB1Q8NDN9 531 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 RNF128Q8TEB7 428 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 SERINC2Q96SA4 455 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 INTS14Q96SY0 518 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ASH2LQ9UBL3 628 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ATG2BQ96BY7 2078 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 NCOR1O75376 2440 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 IGKV1D-42A0A075B6H8 117 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 A0A1W2PPE2 198 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 GPR37O15354 613 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 PRKNO60260 465 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 CCR4P51679 360 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 STARD6P59095 220 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 S100A10P60903 97 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF77Q15935 545 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ZDHHC22Q8N966 263 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 NMES1Q9C002 83 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 CKLFQ9UBR5 152 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 CTSVO60911 334 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 CSTAP01040 98 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 IFNA6P05013 189 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 GSK3AP49840 483 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 SLC25A1P53007 311 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 MGAT2Q10469 447 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ELAVL3Q14576 367 aaKnown RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 FBXO42Q6P3S6 717 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-207ENST00000470763 TEX101Q9BY14 249 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms