RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CENPAP49450 140 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 GPR139Q6DWJ6 353 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 OR2T2Q6IF00 324 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 PTCHD4Q6ZW05 846 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 BCL6BQ8N143 479 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 ZNF420Q8TAQ5 688 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 RSRC1Q96IZ7 334 aaKnown RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 HOPXQ9BPY8 73 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 KCTD14Q9BQ13 255 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 NUAK2Q9H093 628 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 GCM1Q9NP62 436 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 NRIP3Q9NQ35 241 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 VSX1Q9NZR4 365 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-207ENST00000467819 OR5V1Q9UGF6 321 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 IER3IP1Q9Y5U9 82 aa17.7■□□□□ 0.42
COL9A3-207ENST00000467819 IGHV3-64DA0A0J9YX35 117 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 DNAJC9-AS1A6NH13 148 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 CEACAM18A8MTB9 384 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 PTP4A3O75365 173 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 ZNF205O95201 554 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 RGS6P49758 472 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 C8orf82Q6P1X6 216 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-207ENST00000467819 DOK3Q7L591 496 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 ADCK1Q86TW2 530 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 MUC20Q8N307 709 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-207ENST00000467819 MEGF10Q96KG7 1140 aa17.69■□□□□ 0.42
COL9A3-207ENST00000467819 GPX7Q96SL4 187 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-207ENST00000467819 FAM32AQ9Y421 112 aaKnown RBP17.69■□□□□ 0.42
COL9A3-207ENST00000467819 A0A1W2PRQ8 180 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 H0YL77 283 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 WIPF1O43516 503 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 CYB5R3P00387 301 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-207ENST00000467819 HKR1P10072 659 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 PRTN3P24158 256 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 OMPP47874 163 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 NUDT2P50583 147 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 FXYD6P3P58550 94 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 DGCR6Q14129 220 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 MEP1BQ16820 701 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 FBXW12Q6X9E4 464 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 BHLHE23Q8NDY6 225 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 OR5L1Q8NGL2 311 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 TSSK2Q96PF2 358 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 GPA33Q99795 319 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 EFCAB1Q9HAE3 211 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 ATPIF1Q9UII2 106 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 RPS6KA6Q9UK32 745 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 AURKCQ9UQB9 309 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 LRCH1Q9Y2L9 728 aa17.68■□□□□ 0.42
COL9A3-207ENST00000467819 MEGF8Q7Z7M0 2845 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 TRBV4-1A0A0J9YWV2 114 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 J3QW42 95 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 DIRAS1O95057 198 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 RPS2P15880 293 aaKnown RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 CDKN2AP42771 156 aaKnown RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 RPS6KA3P51812 740 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 FOXL1Q12952 345 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 BAMBIQ13145 260 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 SEC23BQ15437 767 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 TUSC1Q2TAM9 212 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 SLC27A4Q6P1M0 643 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 CORO6Q6QEF8 472 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 OR8G5Q8NG78 346 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 OR13G1Q8NGZ3 307 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 APOBEC3DQ96AK3 386 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 C1orf147Q96MC9 270 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 ZNF48Q96MX3 618 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 ZNF582Q96NG8 517 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 SSBP3Q9BWW4 388 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-207ENST00000467819 WDR76Q9H967 626 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 LHFPL6Q9Y693 200 aa17.67■□□□□ 0.42
COL9A3-207ENST00000467819 IGHV3OR16-10A0A075B7F0 116 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 UNC119BA6NIH7 251 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 IFNL4K9M1U5 179 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 DCTN6O00399 190 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 PPP1R3DO95685 299 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 WNT2P09544 360 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 CD80P33681 288 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 SRP9P49458 86 aaKnown RBP17.66■□□□□ 0.42
COL9A3-207ENST00000467819 KCNMB1Q16558 191 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 DNM1P34Q6PK57 102 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 DPY19L2P2Q6ZN68 376 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 GJC3Q8NFK1 279 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 OR52J3Q8NH60 311 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 COQ7Q99807 217 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 MS4A7Q9GZW8 240 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-207ENST00000467819 HDHD2Q9H0R4 259 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 CCDC134Q9H6E4 229 aa17.66■□□□□ 0.42
COL9A3-207ENST00000467819 KRCC1Q9NPI7 259 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-207ENST00000467819 F5H5P2 479 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 MLNRO43193 412 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 CCDC22O60826 627 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 TXNDC12O95881 172 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 RHCEP18577 417 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 CRABP1P29762 137 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 PRSS12P56730 875 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 DBPQ10586 325 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-207ENST00000467819 HACD2Q6Y1H2 254 aa17.65■□□□□ 0.42
COL9A3-207ENST00000467819 MOGAT3Q86VF5 341 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms