RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 FAM215AQ9Y5M1 114 aa0.72□□□□□ -2.29
LRCH3-209ENST00000452660 DNAH8Q96JB1 4490 aa0.72□□□□□ -2.29
LRCH3-209ENST00000452660 KMT2DO14686 5537 aa0.72□□□□□ -2.29
LRCH3-209ENST00000452660 KIAA2026Q5HYC2 2103 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ARHGAP32A7KAX9 2087 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 DOCK4Q8N1I0 1966 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TRAV17A0A0B4J275 112 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 LRP5LA4QPB2 252 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 GABRR3A8MPY1 467 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 C16orf90A8MZG2 172 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 EEF1E1-BLOC1S5C9J1V9 151 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 EEF1E1O43324 174 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 KLF7O75840 302 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TGDSO95455 350 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TNFP01375 233 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 UQCRHP07919 91 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SOD3P08294 240 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 HBQ1P09105 142 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 GIPP09681 153 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 CLUP10909 449 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 KCNE1P15382 129 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF30P17039 623 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 MMP11P24347 488 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ANXA13P27216 316 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 LOXP28300 417 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 PTPN6P29350 595 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ARL2P36404 184 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 CNN1P51911 297 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 KPNA2P52292 529 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 DLX1P56177 255 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 RIPPLY1Q0D2K3 151 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 IFT88Q13099 833 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TFDP1Q14186 410 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ARL6IP1Q15041 203 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 NCF4Q15080 339 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 IRF4Q15306 451 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 STK11Q15831 433 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SNRNP35Q16560 246 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SPIN3Q5JUX0 258 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 HECTD3Q5T447 861 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 PRAMEF7Q5VXH5 474 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 CTRB2Q6GPI1 263 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 GALNT17Q6IS24 598 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SLC39A4Q6P5W5 647 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ISLR2Q6UXK2 745 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF550Q7Z398 422 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 GALNTL5Q7Z4T8 443 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 LUZP2Q86TE4 346 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 RAB43Q86YS6 212 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SLC13A5Q86YT5 568 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 PDCL2Q8N4E4 241 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 C15orf54Q8N8G6 183 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 OR6C4Q8NGE1 309 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 BRSK1Q8TDC3 778 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 MCOLN3Q8TDD5 553 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SLC37A2Q8TED4 501 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF418Q8TF45 676 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 C2orf15Q8WU43 125 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 RNASE6Q93091 150 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 FAM131CQ96AQ9 280 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC127Q96BQ5 260 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 C8orf44Q96CB5 159 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ITCHQ96J02 903 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 RNF157Q96PX1 679 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ADPGKQ9BRR6 497 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TCHPQ9BT92 498 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC94Q9BW85 323 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ANGPTL4Q9BY76 406 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 DEFB127Q9H1M4 99 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ZSCAN16Q9H4T2 348 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 LPAR2Q9HBW0 351 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF160Q9HCG1 818 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 LSM7Q9UK45 103 aaKnown RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 FBXW2Q9UKT8 454 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SCML1Q9UN30 329 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 TRAPPC4Q9Y296 219 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 SOX21Q9Y651 276 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-209ENST00000452660 ARFGEF3Q5TH69 2177 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 NINQ8N4C6 2090 aa0.71□□□□□ -2.3
LRCH3-209ENST00000452660 IGHV5-51A0A0C4DH38 117 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 E9PBE3 544 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 H0YL77 283 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 K7ERQ8 282 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PIRO00625 290 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 CASKO14936 926 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 SLC7A4O43246 635 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ZBTB14O43829 449 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 PALMO75781 387 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 VAMP5O95183 116 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 TDP2O95551 362 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 MT-ND3P03897 115 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 P0C880 135 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 POU2F1P14859 743 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF24P17028 368 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 YWHABP31946 246 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 CTNNA1P35221 906 aaKnown RBP0.7□□□□□ -2.3
LRCH3-209ENST00000452660 RORAP35398 523 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 ACTR1BP42025 376 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 CXCL5P42830 114 aa0.7□□□□□ -2.3
LRCH3-209ENST00000452660 KIR2DS4P43632 304 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms