RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
LIN54-202ENST00000442461 SNU13P55769 128 aaKnown RBP9.41□□□□□ -0.9
LIN54-202ENST00000442461 ZNF385BQ569K4 471 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 OR14C36Q8NHC7 312 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 CMTM2Q8TAZ6 248 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 PSMF1Q92530 271 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 AMDHD1Q96NU7 426 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 PADI1Q9ULC6 663 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 SLC17A2O00624 439 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 ICOSLGO75144 302 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 LEFTY1O75610 366 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 SLC25A4P12235 298 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 HOXC13P31276 330 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 PFN3P60673 137 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 MSMO1Q15800 293 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 FAM181AQ8N9Y4 354 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 BMFQ96LC9 184 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 FOXN4Q96NZ1 517 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 ING1Q9UK53 422 aaPredicted RBP9.41□□□□□ -0.9
LIN54-202ENST00000442461 ZNF814B7Z6K7 855 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 STC2O76061 302 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 EFNA3P52797 238 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 DLK1P80370 383 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 PSRC1Q6PGN9 363 aaPredicted RBP9.41□□□□□ -0.9
LIN54-202ENST00000442461 PAQR9Q6ZVX9 377 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 MOB3CQ70IA8 216 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 OR51F2Q8NH61 342 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 ANKRD9Q96BM1 317 aaPredicted RBP9.41□□□□□ -0.9
LIN54-202ENST00000442461 ABHD6Q9BV23 337 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 NUDT9Q9BW91 350 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 PRTFDC1Q9NRG1 225 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 NUP205Q92621 2012 aa9.41□□□□□ -0.9
LIN54-202ENST00000442461 H0Y8G0 127 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 SLC31A1O15431 190 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 NDUFA2O43678 99 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CT45A8P0DMV1 189 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CT45A9P0DMV2 189 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 SCAND1P57086 179 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 RPS15AP62244 130 aaKnown RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 CTAG1AP78358 180 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 MELKQ14680 651 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 ZNF805Q5CZA5 627 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CT45A2Q5DJT8 189 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 DPPA3Q6W0C5 159 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 FAM160A2Q8N612 972 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 TMEM104Q8NE00 496 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 WFIKKN2Q8TEU8 576 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 FGGYQ96C11 551 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 TM4SF18Q96CE8 201 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 GJD4Q96KN9 370 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 BCL2L10Q9HD36 194 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CBLN4Q9NTU7 201 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 EMC9Q9Y3B6 208 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 AQP7P3A6NL99 342 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 A8MVM7 634 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 H3BQ15 152 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 SDCBPO00560 298 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 LILRB3O75022 631 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 GLI4P10075 376 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 NDUFB7P17568 137 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 PRPH2P23942 346 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 LMAN2Q12907 356 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 OR2L13Q8N349 312 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 DTWD2Q8NBA8 298 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 ZNF740Q8NDX6 193 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 OR4S1Q8NGB4 309 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 REEP6Q96HR9 211 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CAPNS2Q96L46 248 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 Q96M85 177 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 PRRG4Q9BZD6 226 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 Q9N2K0 584 aa9.4□□□□□ -0.9
LIN54-202ENST00000442461 RCC2Q9P258 522 aaKnown RBP9.4□□□□□ -0.9
LIN54-202ENST00000442461 A0A0B4J293 547 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 H7C1C5 153 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 PEX12O00623 359 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 C1orf105O95561 183 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 TRGC2P03986 189 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 NID1P14543 1247 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 PMCHP20382 165 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 ECH1Q13011 328 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 RAB35Q15286 201 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 MFSD9Q8NBP5 474 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 TSTD1Q8NFU3 115 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 OR4D9Q8NGE8 314 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 OR5AR1Q8NGP9 310 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 SH3RF2Q8TEC5 729 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms