RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RPS15AP62244 130 aaKnown RBP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 RPS21P63220 83 aaKnown RBP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 LCN2P80188 198 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 RAD51Q06609 339 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 SCRN3Q0VDG4 424 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 COA6Q5JTJ3 125 aaKnown RBP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 C9orf135Q5VTT2 229 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 H3F3CQ6NXT2 135 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 TRIM40Q6P9F5 258 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 COMTD1Q86VU5 262 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 SPATA24Q86W54 205 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 PLA2G4DQ86XP0 818 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 SELENOHQ8IZQ5 122 aaKnown RBP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 SYCE1Q8N0S2 351 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 TRIML2Q8N7C3 387 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR5W2Q8NH69 310 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 PYROXD1Q8WU10 500 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CAPSLQ8WWF8 208 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 NAT6Q93015 286 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CPB2Q96IY4 423 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 ECSITQ9BQ95 431 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 ACBD6Q9BR61 282 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 UCK2Q9BZX2 261 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CWH43Q9H720 699 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 TMEM165Q9HC07 324 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 RETNQ9HD89 108 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 UBAP1Q9NZ09 502 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 ADA2Q9NZK5 511 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 BFARQ9NZS9 450 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF229Q9UJW7 825 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 NUP50Q9UKX7 468 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 MSH6P52701 1360 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CENPJQ9HC77 1338 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 IGKV1D-17A0A075B6S4 117 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 INS-IGF2F8WCM5 200 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 H3BNH8 94 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 SCAMP2O15127 329 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 EIF4E2O60573 245 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 HUS1O60921 280 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 FGFR1OPO95684 399 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CISD3P0C7P0 127 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 MYL2P10916 166 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 PRPS2P11908 318 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF14P17017 642 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CTRB1P17538 263 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CELP19835 753 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 DEKP35659 375 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ANP32AP39687 249 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCNHP51946 323 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 SUB1P53999 127 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CLDN18P56856 261 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 YWHAGP61981 247 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 YWHAEP62258 255 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ERVK-25P63136 954 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ART3Q13508 389 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 TSC22D1Q15714 1073 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 GABRA6Q16445 453 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 PPM1LQ5SGD2 360 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPR107Q5VW38 600 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 DUX4L9Q6RFH8 374 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 HDDC2Q7Z4H3 204 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 HMGN2P46Q86SG4 172 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 NUDCD3Q8IVD9 361 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CMTM1Q8IZ96 169 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 PUSL1Q8N0Z8 303 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 LINC00469Q8N7U9 141 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 FBXO36Q8NEA4 188 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR5T3Q8NGG3 340 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR13C9Q8NGT0 318 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPR151Q8TDV0 419 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CA5BP1Q8WTZ4 195 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 GEMIN6Q8WXD5 167 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ESR2Q92731 530 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 EXOSC8Q96B26 276 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 NEURL3Q96EH8 262 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 MED8Q96G25 268 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 TMEM175Q9BSA9 504 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 MFFQ9GZY8 342 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CHRNA10Q9GZZ6 450 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 RPP21Q9H633 154 aaKnown RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 MARCOQ9UEW3 520 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR12D3Q9UGF7 316 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CD84Q9UIB8 345 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC17A4Q9Y2C5 497 aa2.28□□□□□ -2.04
HMGB1P49-201ENST00000418882 CNTNAP1P78357 1384 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 UBN2Q6ZU65 1347 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF726A6NNF4 738 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 SIRPB1O00241 398 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 XKRYO14609 159 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 B4GALT5O43286 388 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 E2F6O75461 281 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 IGKV1-17P01599 117 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 IGHV2-5P01817 119 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 APOA1P02647 267 aa2.27□□□□□ -2.05
HMGB1P49-201ENST00000418882 IFNW1P05000 195 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms