RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 LOC100506127A0A0U1RQW1 187 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 TMEM269A0A1B0GVZ9 245 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 OGG1O15527 345 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 GPX5O75715 221 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
VAPB-202ENST00000395802 IGHV1-2P23083 117 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 CRYBB2P43320 205 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 PLP2Q04941 152 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 OTPQ5XKR4 325 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 RPRMLQ8N4K4 120 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 ZNF610Q8N9Z0 462 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 DYNC2LI1Q8TCX1 351 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 THRSPQ92748 146 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 AMELYQ99218 206 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 ELOVL5Q9NYP7 299 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 STUB1Q9UNE7 303 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 SLC5A6Q9Y289 635 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 SF3B6Q9Y3B4 125 aaKnown RBP11.99□□□□□ -0.49
VAPB-202ENST00000395802 R4GMQ9 66 aa11.99□□□□□ -0.49
VAPB-202ENST00000395802 A0A096LPE4 126 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 A0A0G2JNJ9 132 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 OR6C6A6NF89 314 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 DOK2O60496 412 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 PSKH1P11801 424 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 ZNF32P17041 273 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 BMP5P22003 454 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 ALKBH1Q13686 389 aaKnown RBP11.98□□□□□ -0.49
VAPB-202ENST00000395802 DMKNQ6E0U4 476 aaPredicted RBP11.98□□□□□ -0.49
VAPB-202ENST00000395802 ARL9Q6T311 187 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 SPATC1Q76KD6 591 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 SSX8Q7RTT4 187 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 ZNF433Q8N7K0 673 aaPredicted RBP11.98□□□□□ -0.49
VAPB-202ENST00000395802 BCL2L2Q92843 193 aaPredicted RBP11.98□□□□□ -0.49
VAPB-202ENST00000395802 DMRTA2Q96SC8 542 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 KCNJ15Q99712 375 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 RNF167Q9H6Y7 350 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 COQ3Q9NZJ6 369 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 Q9UFV3 132 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 SSR3Q9UNL2 185 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 OSGIN2Q9Y236 505 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 GSTK1Q9Y2Q3 226 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 CACNA1BQ00975 2339 aa11.98□□□□□ -0.49
VAPB-202ENST00000395802 A0A1B0GUH1 482 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 PNMA8CA0A1B0GUJ8 204 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 MAGEB4O15481 346 aaPredicted RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 COX5BP10606 129 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 CD79AP11912 226 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 UGT2B10P36537 528 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 GSG1Q2KHT4 349 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 TBRG1Q3YBR2 411 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 YIF1BQ5BJH7 314 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 SFRP5Q5T4F7 317 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 ZFP41Q8N8Y5 198 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 OR5AK2Q8NH90 309 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 HTRA1Q92743 480 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 TRMT61AQ96FX7 289 aaKnown RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 DCSTAMPQ9H295 470 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 PNRC2Q9NPJ4 139 aaKnown RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 CACNA1CQ13936 2221 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 NBEAQ8NFP9 2946 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 FREM1Q5H8C1 2179 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 IQCMA0A1B0GVH7 501 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 A8MXE2 369 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 PRR32B1ATL7 298 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 LOC110117498-PIK3R3F6TDL0 507 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 CCL21O00585 134 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 LRRTM2O43300 516 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 RAD51DO75771 328 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 WNT11O96014 354 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 MMP7P09237 267 aaPredicted RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 IL32P24001 234 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 GDI2P50395 445 aaKnown RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 TPTEP56180 551 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 RAB1AP62820 205 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 PSG4Q00888 419 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 SLC3A1Q07837 685 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 GABRA6Q16445 453 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 CD200R1LQ6Q8B3 271 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 ZNF704Q6ZNC4 412 aaPredicted RBP11.97□□□□□ -0.49
VAPB-202ENST00000395802 USP43Q70EL4 1123 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 OR2G2Q8NGZ5 317 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 GHSRQ92847 366 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 LRRC46Q96FV0 321 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 ST6GALNAC2Q9UJ37 374 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 ZNF281Q9Y2X9 895 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 POLEQ07864 2286 aa11.97□□□□□ -0.49
VAPB-202ENST00000395802 INTS1Q8N201 2190 aaKnown RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 EEF1E1-BLOC1S5C9J1V9 151 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 E9PI62 339 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms