RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 MPGP29372 298 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 LIMK1P53667 647 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 ERVFRD-1P60508 538 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 PCLAFQ15004 111 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 AQP12AQ8IXF9 295 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 OR51A2Q8NGJ7 313 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 GPR119Q8TDV5 335 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 RDH12Q96NR8 316 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 FUZQ9BT04 418 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 FXYD6Q9H0Q3 95 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 TREX1Q9NSU2 369 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 RABAC1Q9UI14 185 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 POMT1Q9Y6A1 747 aa8.27□□□□□ -1.08
LIMCH1-202ENST00000381753 NUMA1Q14980 2115 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 TNFSF12O43508 249 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 CAV2P51636 162 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 ELFN2Q5R3F8 820 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 SLC16A9Q7RTY1 509 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 SERTAD4Q9NUC0 356 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 MLXQ9UH92 298 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 IGHV1-45A0A0A0MS14 117 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 MED19A0JLT2 244 aaPredicted RBP8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 FAM183AA6NL82 134 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 E9PQ18 207 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 RAF1P04049 648 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 GNAO1P09471 354 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 FAM27D1Q5T7N8 215 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 RNLSQ5VYX0 342 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 LHFPL2Q6ZUX7 228 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 H2BFWTQ7Z2G1 175 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 CD300LFQ8TDQ1 290 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 SLC7A6Q92536 515 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 KIRREL1Q96J84 757 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 OR2A5Q96R48 311 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 MRPS28Q9Y2Q9 187 aaKnown RBP8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 AUP1Q9Y679 476 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 SMIM30A4D0T7 59 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 CYC1P08574 325 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 OR8U8P0C7N1 319 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 LAP3P28838 519 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 ALDH3B1P43353 468 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 SLC37A1P57057 533 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 ALG12Q9BV10 488 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 CLEC5AQ9NY25 188 aa8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
LIMCH1-202ENST00000381753 TERTO14746 1132 aaKnown RBP8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 RBP4P02753 201 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CALCBP10092 127 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 FOXO1Q12778 655 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 INO80CQ6PI98 192 aaPredicted RBP8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 DOK3Q7L591 496 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 NUBPLQ8TB37 319 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 HPSE2Q8WWQ2 592 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 SLCO2A1Q92959 643 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 LGALS12Q96DT0 336 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 GPR78Q96P69 363 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 EBF4Q9BQW3 602 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ACER3Q9NUN7 267 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 MYH6P13533 1939 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 E9PI62 339 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 HSD17B6O14756 317 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ARPC3O15145 178 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 MOSPD3O75425 235 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 MPZL1O95297 269 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 FAM106CPP0CH98 169 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 GPM6AP51674 278 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 DOLPP1Q86YN1 238 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 MS4A15Q8N5U1 240 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CITED4Q96RK1 184 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 TOR3AQ9H497 397 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CD14P08571 375 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ANKRD34CP0C6C1 535 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CCL2P13500 99 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 GK3PQ14409 553 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 GGTA1PQ4G0N0 100 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ZNF626Q68DY1 528 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 LAMTOR1Q6IAA8 161 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 TMEM205Q6UW68 189 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 SERPINA12Q8IW75 414 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 OR5T1Q8NG75 326 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 OR52H1Q8NGJ2 320 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 MYEOVQ96EZ4 313 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ATP5SQ99766 215 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 ABHD6Q9BV23 337 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CACNA1FO60840 1977 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 EDIL3O43854 480 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 SORBS2O94875 1100 aaKnown RBP8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CDRT1O95170 752 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 BDKRB2P30411 391 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 DDOSTP39656 456 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 HBA1P69905 142 aa8.26□□□□□ -1.09
LIMCH1-202ENST00000381753 CDCP2Q5VXM1 449 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms