RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 IFNGR1P15260 489 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ZNF823P16415 610 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 NAGAP17050 411 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 PSMB1P20618 241 aaKnown RBP13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ZP4Q12836 540 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 MS4A18Q3C1V0 323 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 LUZP2Q86TE4 346 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 CDH24Q86UP0 819 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 OR52N5Q8NH56 324 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ASB10Q8WXI3 467 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 DHDHQ9UQ10 334 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 LRP12Q9Y561 859 aa13.83□□□□□ -0.2
CCDC40-202ENST00000374876 ZNF208O43345 1280 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 ZNF780AO75290 641 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-202ENST00000374876 PEX14O75381 377 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 MPZL1O95297 269 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 TMIGD3P0DMS9 266 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-202ENST00000374876 SFTPCP11686 197 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 PTHLHP12272 177 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 SNRPD2P62316 118 aaKnown RBP13.82□□□□□ -0.2
CCDC40-202ENST00000374876 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-202ENST00000374876 FOXF1Q12946 379 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 MFAP5Q13361 173 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 FGD2Q7Z6J4 655 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 GLB1L2Q8IW92 636 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 BEST4Q8NFU0 473 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 C5orf34Q96MH7 638 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 CKLFQ9UBR5 152 aa13.82□□□□□ -0.2
CCDC40-202ENST00000374876 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ANKRD20A5PA0PJZ0 165 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 AKR7A2O43488 359 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 XRCC3O43542 346 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 TPPPO94811 219 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 GLSO94925 669 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 CD2P06729 351 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ZNF41P51814 821 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 MLF1P58340 268 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ELFN2Q5R3F8 820 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 C6orf183Q5T699 404 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ZNF468Q5VIY5 522 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 IGFL2Q6UWQ7 119 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 CATSPERDQ86XM0 798 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 RBMXL3Q8N7X1 1067 aaKnown RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 PPP1R14AQ96A00 147 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 RANBP3Q9H6Z4 567 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 BEX1Q9HBH7 125 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 CHST11Q9NPF2 352 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 MYOTQ9UBF9 498 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 SPENQ96T58 3664 aaKnown RBP13.81□□□□□ -0.2
CCDC40-202ENST00000374876 H3BML4 177 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 OR2J2O76002 312 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 CXCL3P19876 107 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ARG2P78540 354 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 HSF1Q00613 529 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 FMODQ06828 376 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 RAB11BQ15907 218 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 TMEM255AQ5JRV8 349 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 LAMTOR1Q6IAA8 161 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 IGFL3Q6UXB1 125 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 MDGA2Q7Z553 956 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 CPAMD8Q8IZJ3 1885 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 ZADH2Q8N4Q0 377 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 SLC26A10Q8NG04 563 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 OR51D1Q8NGF3 324 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 EMC3Q9P0I2 261 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 LUZP4Q9P127 313 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 FLVCR2Q9UPI3 526 aa13.81□□□□□ -0.2
CCDC40-202ENST00000374876 NPIPB13A6NJU9 1138 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 NPIPB4C9JG80 1138 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 PRAF2O60831 178 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 WNT11O96014 354 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 FBXO45P0C2W1 286 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 CFPP27918 469 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 MSX1P28360 303 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 DLX5P56178 289 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 PLA2G7Q13093 441 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 OLFML2AQ68BL7 652 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 HAS2Q92819 552 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 METTL7AQ9H8H3 244 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 DIABLOQ9NR28 239 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 SDHAF3Q9NRP4 125 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 SHISA8B8ZZ34 492 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 ITGA5P08648 1049 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 SULT1A3P0DMM9 295 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 SULT1A4P0DMN0 295 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 DCTDP32321 178 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 PTGS2P35354 604 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 CD96P40200 585 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 POU3F4P49335 361 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 VEGFCP49767 419 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 MAP2K6P52564 334 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 TMEM225Q6GV28 225 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 ANKRD16Q6P6B7 361 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 DCXRQ7Z4W1 244 aa13.8□□□□□ -0.2
CCDC40-202ENST00000374876 C9orf62Q8N4C0 152 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms