RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CASKO14936 926 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 PPP1R2P9O14990 202 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 KLRC4O43908 158 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 HPGDSO60760 199 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 PRAMEF10O60809 474 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 UGT2B17O75795 530 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 STK17BO94768 372 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 AQP8O94778 261 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SOX30O94993 753 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 HPRP00739 348 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 HLA-AP01891 365 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 C2P06681 752 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 GSTA1P08263 222 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 PRSS56P0CW18 603 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 LIPCP11150 499 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 CDH1P12830 882 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 IRF2P14316 349 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 IGFBP5P24593 272 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 HRH2P25021 359 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 RBM34P42696 430 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 UGT2B15P54855 530 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 FGF8P55075 233 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 OR2B8PP59922 312 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 ZNF45Q02386 682 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 TRAF3Q13114 568 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MYBPHQ13203 477 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 TPBGQ13641 420 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SLC1A5Q15758 541 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 NDUFA9Q16795 377 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 C2orf68Q2NKX9 166 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SYT14P1Q58G82 188 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 TPRG1LQ5T0D9 272 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 FAM102AQ5T9C2 384 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 GGNBP1Q5YKI7 109 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 RTL6Q6ICC9 239 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 RPL13AP3Q6NVV1 102 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SPESP1Q6UW49 350 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 ZNF534Q76KX8 674 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 ANKRD37Q7Z713 158 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 NRMQ8IXM6 262 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 LGI3Q8N145 548 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MREGQ8N565 214 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 HSD17B11Q8NBQ5 300 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 NOXO1Q8NFA2 376 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 OR56A1Q8NGH5 318 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 COQ8AQ8NI60 647 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 IL17DQ8TAD2 202 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MAGEE2Q8TD90 523 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 FAF2Q96CS3 445 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 R3HDM4Q96D70 268 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 YIPF6Q96EC8 236 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 WDR34Q96EX3 536 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 P2RY11Q96G91 374 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 CXorf58Q96LI9 332 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 ZNF75AQ96N20 296 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 ZNF285Q96NJ3 590 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 FMO2Q99518 471 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MEIS3Q99687 375 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 TIMP4Q99727 224 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MAP3K3Q99759 626 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 BTBD10Q9BSF8 475 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 TMEM109Q9BVC6 243 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 CSTL1Q9H114 145 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 SPNS1Q9H2V7 528 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 BOLA2Q9H3K6 86 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 RHOFQ9HBH0 211 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MOV10Q9HCE1 1003 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 Q9N2K0 584 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 C1orf123Q9NWV4 160 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 KLHL13Q9P2N7 655 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 NDRG3Q9UGV2 375 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 AGO1Q9UL18 857 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 FZD4Q9ULV1 537 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 MGAT4AQ9UM21 535 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 CHST2Q9Y4C5 530 aa3.07□□□□□ -1.92
ECHDC1-205ENST00000368295 COL27A1Q8IZC6 1860 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 TNRC6AQ8NDV7 1962 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 TRRAPQ9Y4A5 3859 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 LRP5LA4QPB2 252 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 SLC22A20A6NK97 555 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 DISC1C4P0D8 188 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 F5H697 171 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 TSTD3H0UI37 97 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 PSMD12O00232 456 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 CDIPTO14735 213 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 TAPBPO15533 448 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 EIF1BO60739 113 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 RNASEH1O60930 286 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 FAM20BO75063 409 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 CEACAM4O75871 244 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 MBPP02686 304 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 ISG15P05161 165 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 RHOCP08134 193 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 HCKP08631 526 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 H2BFMP0C1H6 154 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 OR4Q2P0C623 313 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 SLC35G4P0C7Q5 338 aa3.06□□□□□ -1.92
ECHDC1-205ENST00000368295 C8orf88P0DMB2 117 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms