RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 NMES1Q9C002 83 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CHRNA10Q9GZZ6 450 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CSNK1G1Q9HCP0 422 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 APMAPQ9HDC9 416 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 MLXIPLQ9NP71 852 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 USP36Q9P275 1121 aaKnown RBP3.68□□□□□ -1.82
USH2A-202ENST00000366942 SEC14L4Q9UDX3 406 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CBY1Q9Y3M2 126 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 KIF13AQ9H1H9 1805 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TEX48A0A1B0GUV7 120 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TMEM269A0A1B0GVZ9 245 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TMEM200CA6NKL6 621 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 UBE2L6O14933 153 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PPP1R3DO95685 299 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CGB3P0DN86 165 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SERPINA2P20848 420 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 HTR1DP28221 377 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SOX3P41225 446 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PRDX4Q13162 271 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SYT14P1Q58G82 188 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PAGE3Q5JUK9 113 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 FBXW9Q5XUX1 488 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 GLYATQ6IB77 296 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 FAM199XQ6PEV8 388 aaPredicted RBP3.68□□□□□ -1.82
USH2A-202ENST00000366942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 FAM57BQ71RH2 274 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 GOLGA7Q7Z5G4 137 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 COMMD1Q8N668 190 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TEX26Q8N6G2 289 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 KRTCAP2Q8N6L1 136 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 POC1AQ8NBT0 407 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 OR10A7Q8NGE5 316 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 OR5AK3PQ8NH89 298 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 NEIL3Q8TAT5 605 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CD300LFQ8TDQ1 290 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 STK35Q8TDR2 534 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 Q8WTZ3 238 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 ROPN1LQ96C74 230 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SNX18Q96RF0 628 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 AMBNQ9NP70 447 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PILRAQ9UKJ1 303 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SH2B3Q9UQQ2 575 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 MYRFQ9Y2G1 1151 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 KCNK7Q9Y2U2 307 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PEX16Q9Y5Y5 336 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 ENPP4Q9Y6X5 453 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 N4BP2Q86UW6 1770 aaPredicted RBP3.68□□□□□ -1.82
USH2A-202ENST00000366942 H3BSH0 61 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CCL22O00626 93 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 FBXO24O75426 580 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 LYZL6O75951 148 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 EMDP50402 254 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TAS2R46P59540 309 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 YBX1P67809 324 aaKnown RBP3.68□□□□□ -1.82
USH2A-202ENST00000366942 EMX2Q04743 252 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 ELOBQ15370 118 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 CEACAM16Q2WEN9 425 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 C19orf54Q5BKX5 351 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
USH2A-202ENST00000366942 CD300LGQ6UXG3 332 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 OR13C5Q8NGS8 318 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 TMEM163Q8TC26 289 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 NXNL1Q96CM4 212 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PPM1MQ96MI6 270 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 LYSMD1Q96S90 227 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 DLGAP2Q9P1A6 1054 aa3.68□□□□□ -1.82
USH2A-202ENST00000366942 PRSS37A4D1T9 235 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TMEM202A6NGA9 273 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR5B21A6NL26 309 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SNURFLB1AK76 121 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 J3QLW9 94 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SMAD6O43541 496 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 AIREO43918 545 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HPGDSO60760 199 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 S1PR2O95136 353 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 C1orf105O95561 183 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ALDOCP09972 364 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 HIST1H1EP10412 219 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 ZNF19P17023 458 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 AGAP20933 346 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 IGFBP5P24593 272 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 AZGP1P25311 298 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 ARRB2P32121 409 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 GALR1P47211 349 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MRPL19P49406 292 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 ZNF133P52736 654 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 APOC4P55056 127 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 REEP5Q00765 189 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TMED1Q13445 227 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 IGFBP7Q16270 282 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ADPRMQ3LIE5 342 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ACP7Q6ZNF0 438 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DNM1P46Q6ZS02 220 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR51A4Q8NGJ6 313 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DNAJC19Q96DA6 116 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TSPAN32Q96QS1 320 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TEX101Q9BY14 249 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms