RNA–Protein interactions for RNA: ENST00000359947.8

PTPRF-201, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best) BASIC

Gene PTPRF, Length 7,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-201ENST00000359947 TEX101Q9BY14 249 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 SCG5P05408 212 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 SDHAP31040 664 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 GPM6AP51674 278 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 IAH1Q2TAA2 248 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-201ENST00000359947 OR2V1Q8NHB1 315 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 ZNF75AQ96N20 296 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 BCL7BQ9BQE9 202 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 TBPP20226 339 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 MBOAT4Q96T53 435 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 TEAD3Q99594 435 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 OR5G3P0C626 314 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 NANPQ8TBE9 248 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 PSORS1C1Q9UIG5 152 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 KCNG2Q9UJ96 466 aa14.15□□□□□ -0.14
PTPRF-201ENST00000359947 K7EQM0 130 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 CLEC2LP0C7M8 214 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 M6PRP20645 277 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 SRP9P49458 86 aaKnown RBP14.14□□□□□ -0.15
PTPRF-201ENST00000359947 UBE2KP61086 200 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 CDC20BQ86Y33 519 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF573Q86YE8 665 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF439Q8NDP4 499 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 SLC35E1Q96K37 410 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 LRFN5Q96NI6 719 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 IL21Q9HBE4 155 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 BARX1Q9HBU1 254 aaPredicted RBP14.14□□□□□ -0.15
PTPRF-201ENST00000359947 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 FLI1Q01543 452 aaPredicted RBP14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ALKAL2Q6UX46 152 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 HSD17B11Q8NBQ5 300 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 UBE2IP63279 158 aaKnown RBP14.14□□□□□ -0.15
PTPRF-201ENST00000359947 TLE1Q04724 770 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 PCNPQ8WW12 178 aaKnown RBP14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ALS2Q96Q42 1657 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ZDHHC23Q8IYP9 409 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 OR2AK2Q8NG84 335 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 OSGIN2Q9Y236 505 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 PPT1P50897 306 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 TLE4Q04727 773 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 C1QTNF3Q9BXJ4 246 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF391Q9UJN7 358 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 UPK1AO00322 258 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 IGLV3-27P01718 113 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 KMT5CQ86Y97 462 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 CLDN22Q8N7P3 220 aa14.14□□□□□ -0.15
PTPRF-201ENST00000359947 IGHV5-51A0A0C4DH38 117 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 UBBP0CG47 229 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR10G3Q8NGC4 313 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 SPACA9Q96E40 222 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-201ENST00000359947 ATF6BQ99941 703 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 KNTC1P50748 2209 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 TMEM179BQ7Z7N9 219 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 SIAH3Q8IW03 269 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 CCL17Q92583 94 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 C7orf72A4D263 438 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 CCSO14618 274 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 ARPC3O15145 178 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 CEACAM16Q2WEN9 425 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 PRSS36Q5K4E3 855 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 PLXDC2Q6UX71 529 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 LHFPL2Q6ZUX7 228 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 TMEM99Q8N816 258 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 MVB12AQ96EY5 273 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 F6UZH7 168 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 ADH4P08319 380 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 DSCR4P56555 118 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR6M1Q8NGM8 313 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 SLC17A4Q9Y2C5 497 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 CELA2BP08218 269 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-201ENST00000359947 LSAMPQ13449 338 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 CREB3L2Q70SY1 520 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR1M1Q8NGA1 313 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR5H15A6NDH6 313 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR5H14A6NHG9 310 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 OR5H1A6NKK0 313 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 AGAP14A8MT82 685 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 SDCBPO00560 298 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-201ENST00000359947 DUSP8Q13202 625 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 ARIH2OSQ8N7S6 290 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 S1PR3Q99500 378 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 FAM173AQ9BQD7 235 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 RANGRFQ9HD47 186 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-201ENST00000359947 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
PTPRF-201ENST00000359947 ETHE1O95571 254 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 NME1P15531 152 aaKnown RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SPI1P17947 270 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 FAM53BQ14153 422 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 FAM74A1Q5RGS3 127 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 MRGPRX4Q96LA9 322 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SERTM2A0A1B0GWG4 89 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 FRG2CA6NGY1 282 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 AIPO00170 330 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 OIP5O43482 229 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 CSN1S1P47710 185 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SRPXP78539 464 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ZFAND2BQ8WV99 257 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ST8SIA1Q92185 356 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms