RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TSPO2Q5TGU0 170 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 MINDY2Q8NBR6 621 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 TSEN15Q8WW01 171 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 ASB5Q8WWX0 329 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 PHYHIPQ92561 330 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 PNPLA2Q96AD5 504 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 INTS12Q96CB8 462 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 SLC5A6Q9Y289 635 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 IGF2RP11717 2491 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 MAP1BP46821 2468 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 LOC107986453A0A1B0GWG9 222 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 ZNF878C9JN71 531 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 E9PLN8 166 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 P2RY10O00398 339 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 TFECO14948 347 aaPredicted RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 TGM6O95932 706 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 ACTL6AO96019 429 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 TTRP02766 147 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 EIF4EP06730 217 aaKnown RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 PATE4P0C8F1 98 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 NR2C1P13056 603 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 B4GALT1P15291 398 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 ZNF24P17028 368 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 BAK1Q16611 211 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 RSPO1Q2MKA7 263 aaPredicted RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 FAM131AQ6UXB0 335 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 NAA40Q86UY6 237 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SOX7Q9BT81 388 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SRRQ9GZT4 340 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 CALHM2Q9HA72 323 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 NOSIPQ9Y314 301 aaKnown RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 N6AMT1Q9Y5N5 214 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 DOCK7Q96N67 2140 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SVILO95425 2214 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 TRAV17A0A0B4J275 112 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 FABP12A6NFH5 140 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 MAS1P04201 325 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 EVX1P49640 407 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 FOXG1P55316 489 aaPredicted RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 CLDN12P56749 244 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 PPP3R1P63098 170 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 MRPS34P82930 218 aaKnown RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 CEACAM16Q2WEN9 425 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 HES5Q5TA89 166 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SAMD12Q8N8I0 201 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 TRMT10AQ8TBZ6 339 aaKnown RBP16.2■□□□□ 0.18
USP39-201ENST00000323701 TAAR6Q96RI8 345 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SOSTQ9BQB4 213 aa16.2■□□□□ 0.18
USP39-201ENST00000323701 SYNGR4O95473 234 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 ACSM4P0C7M7 580 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 CFL1P23528 166 aaKnown RBP16.19■□□□□ 0.18
USP39-201ENST00000323701 APEX1P27695 318 aaKnown RBP16.19■□□□□ 0.18
USP39-201ENST00000323701 GALK2Q01415 458 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 CCDC92Q53HC0 331 aaPredicted RBP16.19■□□□□ 0.18
USP39-201ENST00000323701 GPR137CQ8N3F9 429 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 FGFBP3Q8TAT2 258 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 TMEM45BQ96B21 275 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 PBOV1Q9GZY1 135 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 GPR35Q9HC97 309 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 SLC7A10Q9NS82 523 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 TMEM38BQ9NVV0 291 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 MCTS1Q9ULC4 181 aaKnown RBP16.19■□□□□ 0.18
USP39-201ENST00000323701 GUCA1AP43080 201 aaPredicted RBP16.19■□□□□ 0.18
USP39-201ENST00000323701 ZNF84P51523 738 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 HIST1H3AP68431 136 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 BCL2L15Q5TBC7 163 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 HIST2H3PS2Q5TEC6 136 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 FAM27BQ5VT28 67 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 HIST2H3AQ71DI3 136 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 TCF7L1Q9HCS4 588 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 CAMK2AQ9UQM7 478 aa16.19■□□□□ 0.18
USP39-201ENST00000323701 IFITM5A6NNB3 132 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 MRPL33O75394 65 aaKnown RBP16.18■□□□□ 0.18
USP39-201ENST00000323701 DBHP09172 617 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 CPN1P15169 458 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 MAPK3P27361 379 aaPredicted RBP16.18■□□□□ 0.18
USP39-201ENST00000323701 ZNF121P58317 390 aaPredicted RBP16.18■□□□□ 0.18
USP39-201ENST00000323701 MZT2AQ6P582 158 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 CPT1CQ8TCG5 803 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 ACOT12Q8WYK0 555 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 SLX1AQ9BQ83 275 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 PRRG4Q9BZD6 226 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 PPP1R3EQ9H7J1 279 aa16.18■□□□□ 0.18
USP39-201ENST00000323701 ISG15P05161 165 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 HSD11B1P28845 292 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 DCTDP32321 178 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 PSMA6P60900 246 aaKnown RBP16.17■□□□□ 0.18
USP39-201ENST00000323701 C9orf135Q5VTT2 229 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 KLHL24Q6TFL4 600 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 NUFIP2Q7Z417 695 aaKnown RBP16.17■□□□□ 0.18
USP39-201ENST00000323701 ELMOD2Q8IZ81 293 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 KCTD12Q96CX2 325 aaKnown RBP16.17■□□□□ 0.18
USP39-201ENST00000323701 BCO1Q9HAY6 547 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 DHDHQ9UQ10 334 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 MED12LQ86YW9 2145 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 IGHG3P01860 377 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 RAF1P04049 648 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 ADRB1P08588 477 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 TAF13Q15543 124 aa16.17■□□□□ 0.18
USP39-201ENST00000323701 RHOUQ7L0Q8 258 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms