RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PPP1R1CQ8WVI7 109 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 FRZBQ92765 325 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 EDAQ92838 391 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 SCARF2Q96GP6 870 aaPredicted RBP6□□□□□ -1.45
ZNF540-201ENST00000316433 DPH1Q9BZG8 443 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 OR10A5Q9H207 317 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 MTIF3Q9H2K0 278 aaKnown RBP6□□□□□ -1.45
ZNF540-201ENST00000316433 ICAM5Q9UMF0 924 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 PRG3Q9Y2Y8 225 aaPredicted RBP6□□□□□ -1.45
ZNF540-201ENST00000316433 INSL5Q9Y5Q6 135 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 A0A0B4J2A0 478 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 LYPD3O95274 346 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 TDGF1P13385 188 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 OPRD1P41143 372 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 PTH2RP49190 550 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 CLDN12P56749 244 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 PRPS1P60891 318 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 ELOBQ15370 118 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 VWA1Q6PCB0 445 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 LILRA6Q6PI73 481 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 CXCL17Q6UXB2 119 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 GRINAQ7Z429 371 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 CFAP52Q8N1V2 620 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 AMER3Q8N944 861 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 OR5L2Q8NGL0 311 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 OR14C36Q8NHC7 312 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 NT5CQ8TCD5 201 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF480Q8WV37 535 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 G6PC3Q9BUM1 346 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 CXorf36Q9H7Y0 433 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 APMAPQ9HDC9 416 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 IL19Q9UHD0 177 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 SHPKQ9UHJ6 478 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 OR52A1Q9UKL2 312 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 FBXW2Q9UKT8 454 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 NOD1Q9Y239 953 aa6□□□□□ -1.45
ZNF540-201ENST00000316433 LRP4O75096 1905 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 IGLON5A6NGN9 336 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 M0QZ24 198 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 AQP7O14520 342 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CYB5BO43169 146 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 LRATO95237 230 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 AIFM1O95831 613 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 EPPINO95925 133 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 IFNA21P01568 189 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 STAG3L3P0CL85 134 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PGAM2P15259 253 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SERPINA2P20848 420 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 MAOAP21397 527 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ATXN7L2Q5T6C5 722 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF322Q6U7Q0 402 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 MBOAT2Q6ZWT7 520 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CEACAM19Q7Z692 300 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 GRASPQ7Z6J2 395 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ADIPOR2Q86V24 386 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF100Q8IYN0 542 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 OR6N1Q8NGY5 312 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 LGALS14Q8TCE9 139 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CD300LFQ8TDQ1 290 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SMARCD2Q92925 531 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PHB2Q99623 299 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 TIMP4Q99727 224 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 AIF1LQ9BQI0 150 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 RSPO3Q9BXY4 272 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ACTRT3Q9BYD9 372 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 LINC00597Q9H2U6 94 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 TCEAL2Q9H3H9 227 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 BPIFA1Q9NP55 256 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CYTL1Q9NRR1 136 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 B4GALT6Q9UBX8 382 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CES1P1Q9UKY3 287 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 FCF1Q9Y324 198 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PRAMEF26H0Y7S4 382 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PRICKLE3O43900 615 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 DNAJB6O75190 326 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CPSF4O95639 269 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PMS2P2O95744 297 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 UMODP07911 640 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 PNLIPP16233 465 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 GZMHP20718 246 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CTGFP29279 349 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ALDH3B1P43353 468 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 EFNA3P52797 238 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 RPS13P62277 151 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 TBPL1P62380 186 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 UBE2V1Q13404 147 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 CBFBQ13951 182 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 DUSP5Q16690 384 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 FRRS1Q6ZNA5 592 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 TMPRSS11BQ86T26 416 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 OR4K17Q8NGC6 315 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 OR2D3Q8NGH3 330 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 WFDC5Q8TCV5 224 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 RSPRY1Q96DX4 576 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SMIM12Q96EX1 92 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 FAM46AQ96IP4 442 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SNX22Q96L94 193 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SPON2Q9BUD6 331 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms