RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ZNF254O75437 659 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 DCKP27707 260 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 ATP6V1E1P36543 226 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 GRB2P62993 217 aaKnown RBP12.2□□□□□ -0.46
VPS25-201ENST00000253794 ALKBH2Q6NS38 261 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 ZNF679Q8IYX0 411 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 PAQR4Q8N4S7 273 aaPredicted RBP12.2□□□□□ -0.46
VPS25-201ENST00000253794 ACBD7Q8N6N7 88 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 OR52I1Q8NGK6 324 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 OR8B4Q96RC9 309 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 KCNJ15Q99712 375 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 NIPAL2Q9H841 368 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 BAHCC1Q9P281 2608 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 CADP27708 2225 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 A0A1W2PQL4 384 aaPredicted RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 C5orf49A4QMS7 147 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 PRR32B1ATL7 298 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SLC1A7O00341 560 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SULT1C4O75897 302 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 APOC1P02654 83 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 NR4A1P22736 598 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 TUBG1P23258 451 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SSTR2P30874 369 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 WNT5AP41221 380 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 RGS6P49758 472 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 HCCSP53701 268 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 ZNF85Q03923 595 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 TLE4Q04727 773 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 HGFACQ04756 655 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 TMEM154Q6P9G4 183 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 ZNF322Q6U7Q0 402 aaPredicted RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 RFLNBQ8N5W9 214 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 LILRB1Q8NHL6 650 aaPredicted RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 SMAP2Q8WU79 429 aaPredicted RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 THEM6Q8WUY1 208 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 GGHQ92820 318 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SPTSSAQ969W0 71 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 CNBD2Q96M20 576 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 SIGLEC11Q96RL6 698 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 C1QTNF5Q9BXJ0 243 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 DUSP21Q9H596 190 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 CDH20Q9HBT6 801 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 TBCCD1Q9NVR7 557 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 DIMT1Q9UNQ2 313 aaKnown RBP12.19□□□□□ -0.46
VPS25-201ENST00000253794 MYRFQ9Y2G1 1151 aa12.19□□□□□ -0.46
VPS25-201ENST00000253794 ABCA4P78363 2273 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 FBN2P35556 2912 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 A0A1W2PPR1 153 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 M0R135 149 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 XPNPEP2O43895 674 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 APOL3O95236 402 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ABHD16AO95870 558 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 DBHP09172 617 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 CCL2P13500 99 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 TPTEP56180 551 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 SLC35A2P78381 396 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 MED21Q13503 144 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
VPS25-201ENST00000253794 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 RBM48Q5RL73 367 aaKnown RBP12.18□□□□□ -0.46
VPS25-201ENST00000253794 RNLSQ5VYX0 342 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ARL9Q6T311 187 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 DRAM2Q6UX65 266 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ZNF704Q6ZNC4 412 aaPredicted RBP12.18□□□□□ -0.46
VPS25-201ENST00000253794 SSX6Q7RTT6 188 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 KCTD20Q7Z5Y7 419 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 KBTBD8Q8NFY9 601 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 OR10H4Q8NGA5 316 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 SLC7A6Q92536 515 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ZNF799Q96GE5 643 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 C4orf45Q96LM5 186 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 KCNS3Q9BQ31 491 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 COPS4Q9BT78 406 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 MROQ9BYG7 248 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 BCL2L14Q9BZR8 327 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ZNF442Q9H7R0 627 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ELOVL3Q9HB03 270 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 SLCO1C1Q9NYB5 712 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 MRM2Q9UI43 246 aaKnown RBP12.18□□□□□ -0.46
VPS25-201ENST00000253794 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 PCDHGB5Q9Y5G0 923 aa12.18□□□□□ -0.46
VPS25-201ENST00000253794 ACOD1A6NK06 481 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 H3BSA7 217 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 SMPD2O60906 423 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 FAM20BO75063 409 aa12.17□□□□□ -0.46
VPS25-201ENST00000253794 SRSF10O75494 262 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms