RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	UGT1A3	P35503	534 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	NUDT1	P36639	197 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	CRYBB2	P43320	205 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	CSRP3	P50461	194 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	LMO4	P61968	165 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	PPP1CA	P62136	330 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	MS4A2	Q01362	244 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	ST3GAL3	Q11203	375 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	CYLC2	Q14093	348 aa	Predicted RBP	4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC10A1	Q14973	349 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	NHLRC3	Q5JS37	347 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	LIPN	Q5VXI9	398 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	C17orf82	Q86X59	251 aa	Predicted RBP	4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	MCOLN2	Q8IZK6	566 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	ZNF557	Q8N988	423 aa	Predicted RBP	4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	TMEM35B	Q8NCS4	154 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	VN1R17P	Q8TDU5	208 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	ADAMTS16	Q8TE57	1224 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	ECHDC3	Q96DC8	303 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	PPP1R16A	Q96I34	528 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	MCEE	Q96PE7	176 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	SOST	Q9BQB4	213 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	SNRNP25	Q9BV90	132 aa	Known RBP	4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	IKZF5	Q9H5V7	419 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	EXO5	Q9H790	373 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	BFAR	Q9NZS9	450 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	PRODH2	Q9UF12	536 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	PHF11	Q9UIL8	331 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	N6AMT1	Q9Y5N5	214 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	ITPR2	Q14571	2701 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	SPTA1	P02549	2419 aa		4.4	□□□□□ -1.71
NRXN1-223	ENST00000625891	MDC1	Q14676	2089 aa	Known RBP	4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	DNHD1	Q96M86	4753 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	CELSR1	Q9NYQ6	3014 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	PRRC2C	Q9Y520	2896 aa	Known RBP	4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	BTBD17	A6NE02	478 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	EFCAB7	A8K855	629 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891		H0YIV9	168 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	NVL	O15381	856 aa	Known RBP	4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	RAMP3	O60896	148 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	LIPC	P11150	499 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	CTSE	P14091	401 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	FGF9	P31371	208 aa	Predicted RBP	4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	DAP3	P51398	398 aa	Known RBP	4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	GFER	P55789	205 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	ASPH	Q12797	758 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	TRIM16L	Q309B1	348 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	TCTEX1D4	Q5JR98	221 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	RAET1L	Q5VY80	246 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	DHDDS	Q86SQ9	333 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	OR56A4	Q8NGH8	313 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	OR4Q3	Q8NH05	313 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	FAM81A	Q8TBF8	368 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	CXorf40A	Q8TE69	158 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	MCUR1	Q96AQ8	359 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	CXorf40B	Q96DE9	158 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	NUS1	Q96E22	293 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	ZNF670	Q9BS34	389 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	TM2D1	Q9BX74	207 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	ADNP	Q9H2P0	1102 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC23A2	Q9UGH3	650 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	STAP1	Q9ULZ2	295 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	ABCG2	Q9UNQ0	655 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	CSAG2	Q9Y5P2	127 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	LRRK2	Q5S007	2527 aa		4.39	□□□□□ -1.71
NRXN1-223	ENST00000625891	IGHV1OR21-1	A0A087WYE8	117 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	GOLGA6L4	A6NEF3	574 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SRRM5	B3KS81	715 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TRDC	B7Z8K6	153 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	DFFA	O00273	331 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	FCN1	O00602	326 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PRKY	O43930	277 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	OR10H3	O60404	316 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	RAD1	O60671	282 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	E2F6	O75461	281 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	UPK3A	O75631	287 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SNRNP200	O75643	2136 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	KBTBD11	O94819	623 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	GNA14	O95837	355 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	REN	P00797	406 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TNF	P01375	233 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CRYGB	P07316	175 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	HOXD4	P09016	255 aa	Predicted RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	THRA	P10827	490 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CCNB1	P14635	433 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	COX5A	P20674	150 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SDC4	P31431	198 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	HNRNPH3	P31942	346 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CASP14	P31944	242 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	STAR	P49675	285 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PRKX	P51817	358 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	RPL32	P62910	135 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	MRPS11	P82912	194 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	ELOC	Q15369	112 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	DEFB109B	Q30KR1	87 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SPANXN2	Q5MJ10	180 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CCDC137	Q6PK04	289 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TMEM107	Q6UX40	140 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	ZNF600	Q6ZNG1	722 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms