RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KLHDC2Q9Y2U9 406 aa17.27■□□□□ 0.36
PDLIM2-221ENST00000622702 TACC2O95359 2948 aa17.27■□□□□ 0.35
PDLIM2-221ENST00000622702 ITPR2Q14571 2701 aa17.27■□□□□ 0.35
PDLIM2-221ENST00000622702 RTTNQ86VV8 2226 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 SGCEO43556 437 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 IGKV3-15P01624 115 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 THBDP07204 575 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 LYNP07948 512 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 DCKP27707 260 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 HCCSP53701 268 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 EIF2B1Q14232 305 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 CCDC92Q53HC0 331 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 PABPC1L2AQ5JQF8 200 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 SEZ6L2Q6UXD5 910 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 RHOUQ7L0Q8 258 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 ACBD7Q8N6N7 88 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 OR10H4Q8NGA5 316 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 IPCEF1Q8WWN9 437 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 MED18Q9BUE0 208 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 WNT5BQ9H1J7 359 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 PNRC2Q9NPJ4 139 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 INPP5EQ9NRR6 644 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 FBXL3Q9UKT7 428 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 COPS3Q9UNS2 423 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 FBN2P35556 2912 aa17.26■□□□□ 0.35
PDLIM2-221ENST00000622702 PHYHO14832 338 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 RAB36O95755 333 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 ST3GAL4Q11206 333 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 RAB35Q15286 201 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 C3orf36Q3SXR2 165 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 AHSA2Q719I0 299 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 VASH1Q7L8A9 365 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 ALDH16A1Q8IZ83 802 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 OR10S1Q8NGN2 331 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 FAM222BQ8WU58 562 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 ASB17Q8WXJ9 295 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 AMELYQ99218 206 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 COPS4Q9BT78 406 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 HDHD2Q9H0R4 259 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 PLEK2Q9NYT0 353 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 ATPIF1Q9UII2 106 aa17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 DIMT1Q9UNQ2 313 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-221ENST00000622702 A0A1W2PQL4 384 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 CYSRT1A8MQ03 144 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF670-ZNF695F2Z2N8 137 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 IGLV1-44P01699 117 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 SERPINA5P05154 406 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 COX5BP10606 129 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 PLP2Q04941 152 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ELFN2Q5R3F8 820 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF774Q6NX45 483 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 AKR7LQ8NHP1 331 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 THEM6Q8WUY1 208 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 RNF133Q8WVZ7 376 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 SLAMF6Q96DU3 332 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 C14orf79Q96F83 325 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 TMEM80Q96HE8 168 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 DACH2Q96NX9 599 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 TBX5Q99593 518 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 DDX28Q9NUL7 540 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 PAK1IP1Q9NWT1 392 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 APCP25054 2843 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 OR6C6A6NF89 314 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 PTGES3LE9PB15 166 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 SYNGR3O43761 229 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 DOK2O60496 412 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ADRA2AP08913 450 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 EPXP11678 715 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF14P17017 642 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ROM1Q03395 351 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF85Q03923 595 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 KCTD18Q6PI47 426 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF584Q8IVC4 421 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 RFLNBQ8N5W9 214 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 CPEB3Q8NE35 698 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 MYDGFQ969H8 173 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 SIGLEC11Q96RL6 698 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF649Q9BS31 505 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 NPAP1Q9NZP6 1156 aa17.24■□□□□ 0.35
PDLIM2-221ENST00000622702 CACNA1DQ01668 2161 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 IQCMA0A1B0GVH7 501 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 DAPL1A0PJW8 107 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 ZNF878C9JN71 531 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 PTHP01270 115 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 CDK1P06493 297 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 SSTR2P30874 369 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 CHN2P52757 468 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 GABARAPL2P60520 117 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 MVKQ03426 396 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 TLE4Q04727 773 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 EGR3Q06889 387 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 ECH1Q13011 328 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 RAB39AQ14964 217 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 TMEM154Q6P9G4 183 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 DEGS2Q6QHC5 323 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 SSX6Q7RTT6 188 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 STX19Q8N4C7 294 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 OR1F12Q8NHA8 337 aa17.23■□□□□ 0.35
PDLIM2-221ENST00000622702 COQ7Q99807 217 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms