RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PRRG4Q9BZD6 226 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ULBP2Q9BZM5 246 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 C1orf198Q9H425 327 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 LDAHQ9H6V9 325 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ZMAT3Q9HA38 289 aaKnown RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 CALHM2Q9HA72 323 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SIAEQ9HAT2 523 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 CRLF2Q9HC73 371 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ZNF319Q9P2F9 582 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 NLKQ9UBE8 527 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 POU2F3Q9UKI9 436 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 DHDHQ9UQ10 334 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 LIPGQ9Y5X9 500 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 V9GY05 133 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 TPRP12270 2363 aaKnown RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 A0A087WZY1 265 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 A0A096LPE4 126 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 LOC107986453A0A1B0GWG9 222 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 A0A1W2PNV4 684 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 A0A1W2PPZ6 126 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 TMEM212A6NML5 194 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 IFITM5A6NNB3 132 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 CENPBD1B2RD01 187 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 E9PLN8 166 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PLA2G10O15496 165 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 GPRIN2O60269 458 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SLC43A1O75387 559 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 GATBO75879 557 aaKnown RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 KRT33AO76009 404 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AQP8O94778 261 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ABOP16442 354 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PTGS2P35354 604 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 RFX2P48378 723 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 MEOX1P50221 254 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 FOXG1P55316 489 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 PPIAP62937 165 aaKnown RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 H3F3AP84243 136 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 DGCR2P98153 550 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 RASGEF1BQ0VAM2 473 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 RNFT1Q5M7Z0 435 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AGAP7PQ5VUJ5 663 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PAMR1Q6UXH9 720 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 LINC00299Q6ZSB3 139 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 LINGO2Q7L985 606 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AAED1Q7RTV5 226 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 IL17RDQ8NFM7 739 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 OR6X1Q8NH79 312 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ITFG2Q969R8 447 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 FER1L6-AS2Q96M78 137 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 WDFY2Q96P53 400 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AGAP4Q96P64 663 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 OR2M2Q96R28 347 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 NAA11Q9BSU3 229 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 BEX2Q9BXY8 128 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SLITRK2Q9H156 845 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PPP1R3EQ9H7J1 279 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AUNIPQ9H7T9 357 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 BEX1Q9HBH7 125 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ABI3Q9P2A4 366 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 CYB5R1Q9UHQ9 305 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 BOKQ9UMX3 212 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 TRAPPC4Q9Y296 219 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 NBASA2RRP1 2371 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PRR14LQ5THK1 2151 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 COL27A1Q8IZC6 1860 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 SPTA1P02549 2419 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ANKRD33BA6NCL7 494 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 TM4SF5O14894 197 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 DHHO43323 396 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 EIF1BO60739 113 aaKnown RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 KDM4BO94953 1096 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PMS2P2O95744 297 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SP1P08047 785 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 CCNOP22674 350 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 PITPNBP48739 271 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 MAP2K6P52564 334 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 EFNB2P52799 333 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 NKX2-5P52952 324 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 BLVRAP53004 296 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ZNF121P58317 390 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 RAC3P60763 192 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 BCL2L15Q5TBC7 163 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 ASPHD2Q6ICH7 369 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SLC25A25Q6KCM7 469 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 FAAP20Q6NZ36 180 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SLC25A47Q6Q0C1 308 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 UNQ9370/PRO34162Q6UXP9 181 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ABHD12BQ7Z5M8 362 aaPredicted RBP3.04□□□□□ -1.92
LIG4-205ENST00000614526 TPRA1Q86W33 373 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 TUSC5Q8IXB3 177 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 OR13C9Q8NGT0 318 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 OR2V1Q8NHB1 315 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 AKR7LQ8NHP1 331 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 SYNPRQ8TBG9 265 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 UBASH3BQ8TF42 649 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ASB5Q8WWX0 329 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 ASB17Q8WXJ9 295 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 FAM46BQ96A09 425 aa3.04□□□□□ -1.92
LIG4-205ENST00000614526 RFT1Q96AA3 541 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms