RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ZNF540Q8NDQ6 660 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 FAM222BQ8WU58 562 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 THEM6Q8WUY1 208 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 GGHQ92820 318 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 TMEM80Q96HE8 168 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 JAM3Q9BX67 310 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 MRPS26Q9BYN8 205 aaKnown RBP9.31□□□□□ -0.92
SMAD4-214ENST00000592186 HDHD2Q9H0R4 259 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 DUSP21Q9H596 190 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 TMEM165Q9HC07 324 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-214ENST00000592186 PLEK2Q9NYT0 353 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 UBAP1Q9NZ09 502 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 ZNF224Q9NZL3 707 aa9.31□□□□□ -0.92
SMAD4-214ENST00000592186 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-214ENST00000592186 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-214ENST00000592186 DIMT1Q9UNQ2 313 aaKnown RBP9.31□□□□□ -0.92
SMAD4-214ENST00000592186 ALPK2Q86TB3 2170 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 INTS1Q8N201 2190 aaKnown RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MYO18BQ8IUG5 2567 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 OR6C6A6NF89 314 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 PTGES3LE9PB15 166 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 XPNPEP2O43895 674 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 SULT1C4O75897 302 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 IGHA1P01876 353 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 TACSTD2P09758 323 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 PATE4P0C8F1 98 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 IGFBP2P18065 325 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 CRHBPP24387 322 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 PTAFRP25105 342 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 CCKARP32238 428 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 GRB2P62993 217 aaKnown RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 ROM1Q03395 351 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 DBPQ10586 325 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 ST3GAL4Q11206 333 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 TAF13Q15543 124 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 RNLSQ5VYX0 342 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 CORO6Q6QEF8 472 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 ARL9Q6T311 187 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 TMEM108Q6UXF1 575 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 UNQ6126/PRO20091Q6UXV3 157 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 PLEKHG7Q6ZR37 379 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MDP1Q86V88 176 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 LINC00346Q8IVM7 164 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 DMRTC2Q8IXT2 367 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 OR10H4Q8NGA5 316 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 OR4F15Q8NGB8 312 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 OR52I1Q8NGK6 324 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 OR1F12Q8NHA8 337 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 HAVCR2Q8TDQ0 301 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 ST7LQ8TDW4 575 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 RNF133Q8WVZ7 376 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 HTRA1Q92743 480 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 SPTSSAQ969W0 71 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MAP6Q96JE9 813 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 DCLRE1CQ96SD1 692 aaKnown RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 COQ7Q99807 217 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 SPOCK3Q9BQ16 436 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 ABHD6Q9BV23 337 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MROQ9BYG7 248 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 NIPAL2Q9H841 368 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 FKBP14Q9NWM8 211 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 MYRFQ9Y2G1 1151 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 EXOSC1Q9Y3B2 195 aaKnown RBP9.3□□□□□ -0.92
SMAD4-214ENST00000592186 PCDHGB5Q9Y5G0 923 aa9.3□□□□□ -0.92
SMAD4-214ENST00000592186 A0A1W2PQL4 384 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ZNF878C9JN71 531 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 PRSS44E7EML9 344 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 RER1O15258 196 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 GOSR1O95249 250 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 THBDP07204 575 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ZNF14P17017 642 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 STOMP27105 288 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 GRNP28799 593 aaKnown RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 DCTDP32321 178 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 APLNRP35414 380 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 GDI2P50395 445 aaKnown RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 CHN2P52757 468 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 HCCSP53701 268 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 GABARAPL2P60520 117 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ACTA2P62736 377 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ACTG2P63267 376 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 SLC35A2P78381 396 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 TBC1D28Q2M2D7 210 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ZNF322Q6U7Q0 402 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 TMPRSS11AQ6ZMR5 421 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 Q6ZNX1 250 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 CFAP77Q6ZQR2 320 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 KRT77Q7Z794 578 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 C1orf174Q8IYL3 243 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 ZNF679Q8IYX0 411 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 CPEB3Q8NE35 698 aaKnown RBP9.29□□□□□ -0.92
SMAD4-214ENST00000592186 AKR7LQ8NHP1 331 aa9.29□□□□□ -0.92
SMAD4-214ENST00000592186 LINC01560Q8TB33 94 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms