RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
CCNF-203ENST00000564236 IL19Q9UHD0 177 aa14.13□□□□□ -0.15
CCNF-203ENST00000564236 RPS6KA6Q9UK32 745 aa14.13□□□□□ -0.15
CCNF-203ENST00000564236 TMEM89A2RUT3 159 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 TIMM8AO60220 97 aaPredicted RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 KHDRBS3O75525 346 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 FOXH1O75593 365 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 H1F0P07305 194 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 TNFRSF1AP19438 455 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 CPT2P23786 658 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 MDH1P40925 334 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 HIST1H3AP68431 136 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 HIST2H3PS2Q5TEC6 136 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 THSD4Q6ZMP0 1018 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 DPY19L2P2Q6ZN68 376 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 HIST2H3AQ71DI3 136 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 PTP4A1Q93096 173 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 FAM46AQ96IP4 442 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 SIGLEC11Q96RL6 698 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 KCTD14Q9BQ13 255 aaPredicted RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 RBM4Q9BWF3 364 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 SUCNR1Q9BXA5 334 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 MYLK2Q9H1R3 596 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 SYT4Q9H2B2 425 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 DCAF13Q9NV06 445 aaKnown RBP14.12□□□□□ -0.15
CCNF-203ENST00000564236 STARD10Q9Y365 291 aa14.12□□□□□ -0.15
CCNF-203ENST00000564236 TANC2Q9HCD6 1990 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 A0A1B0GWJ7 208 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 A8MXK9 166 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 FSTL3O95633 263 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 RAC2P15153 192 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 ADRA2CP18825 462 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 TNFSF4P23510 183 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 CFPP27918 469 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 RGS6P49758 472 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 NUDT2P50583 147 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 CCDC92Q53HC0 331 aaPredicted RBP14.11□□□□□ -0.15
CCNF-203ENST00000564236 PGM2L1Q6PCE3 622 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 C12orf54Q6X4T0 127 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 FBXW12Q6X9E4 464 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 LRRC28Q86X40 367 aaPredicted RBP14.11□□□□□ -0.15
CCNF-203ENST00000564236 SPICQ8N5J4 248 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 OR1F12Q8NHA8 337 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 DVL3Q92997 716 aaPredicted RBP14.11□□□□□ -0.15
CCNF-203ENST00000564236 FAM162AQ96A26 154 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 RASD2Q96D21 266 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 CMBLQ96DG6 245 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 CMTM5Q96DZ9 223 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 C7orf69Q9H7B7 122 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 MED4Q9NPJ6 270 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 DCAF16Q9NXF7 216 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 PLEK2Q9NYT0 353 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 ASH2LQ9UBL3 628 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 SAMD4AQ9UPU9 718 aaKnown RBP14.11□□□□□ -0.15
CCNF-203ENST00000564236 TENM1Q9UKZ4 2725 aa14.11□□□□□ -0.15
CCNF-203ENST00000564236 F5H0A9 414 aaPredicted RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 TRIM77I1YAP6 450 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 IFNL4K9M1U5 179 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 IMPA2O14732 288 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 SURF4O15260 269 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 SLC16A7O60669 478 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 ZFP36P26651 326 aaKnown RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 PRDX6P30041 224 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 PSME3P61289 254 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 SEC23BQ15437 767 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 KRTAP27-1Q3LI81 207 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 PTCHD4Q6ZW05 846 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 DEFB108BQ8NET1 73 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 ST7LQ8TDW4 575 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 RSRC1Q96IZ7 334 aaKnown RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 NUAK2Q9H093 628 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 GORASP2Q9H8Y8 452 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 PATZ1Q9HBE1 687 aaKnown RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 SPAG4Q9NPE6 437 aa14.1□□□□□ -0.15
CCNF-203ENST00000564236 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 COA3Q9Y2R0 106 aaPredicted RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 FAM32AQ9Y421 112 aaKnown RBP14.1□□□□□ -0.15
CCNF-203ENST00000564236 TRBV4-1A0A0J9YWV2 114 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 ISPDA4D126 451 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 ARPC3O15145 178 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 SEMG1P04279 462 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 NCK1P16333 377 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 CRABP1P29762 137 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 CDKN2AP42771 156 aaKnown RBP14.09□□□□□ -0.15
CCNF-203ENST00000564236 SLC6A9P48067 706 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 RPS6KA3P51812 740 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 BTG1P62324 171 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 LCN2P80188 198 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 GLYATQ6IB77 296 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 COLCA1Q6ZS62 124 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 OR2Z1Q8NG97 314 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 POP5Q969H6 163 aaKnown RBP14.09□□□□□ -0.15
CCNF-203ENST00000564236 GPA33Q99795 319 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 COQ7Q99807 217 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
CCNF-203ENST00000564236 IGLV1-36A0A0B4J1U3 117 aa14.08□□□□□ -0.16
CCNF-203ENST00000564236 RER1O15258 196 aa14.08□□□□□ -0.16
CCNF-203ENST00000564236 ZNF12P17014 697 aa14.08□□□□□ -0.16
CCNF-203ENST00000564236 ERFP50548 548 aa14.08□□□□□ -0.16
CCNF-203ENST00000564236 COX10Q12887 443 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms