RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 GNG8Q9UK08 70 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 TRAV27A0A087WT01 109 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 IGHV5-51A0A0C4DH38 117 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 MFNGO00587 321 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 FARS2O95363 451 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 NGFRP08138 427 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 OR8U8P0C7N1 319 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 FUT7Q11130 342 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 OR10K2Q6IF99 312 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 STAC2Q6ZMT1 411 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 TMEM229BQ8NBD8 167 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 OR51A7Q8NH64 312 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 WNT2BQ93097 391 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 CDC6Q99741 560 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 CHST6Q9GZX3 395 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 Q9N2J8 555 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC17A5Q9NRA2 495 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 PPP4R1LQ9P1A2 415 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 LPAR3Q9UBY5 353 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 TMEM184BQ9Y519 407 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 TRIOO75962 3097 aa12.58□□□□□ -0.4
RABGGTA-220ENST00000560998 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF705EA8MWA4 302 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 CT45A8P0DMV1 189 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 CT45A9P0DMV2 189 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 PRSS3P35030 304 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 HSD17B7P56937 341 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 PON3Q15166 354 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 CT45A2Q5DJT8 189 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 ALG10BQ5I7T1 473 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 DNLZQ5SXM8 178 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 GABRG1Q8N1C3 465 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 RFLNBQ8N5W9 214 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 C16orf52Q8NHV5 167 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 GGACTQ9BVM4 153 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 OR10A5Q9H207 317 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 RHOFQ9HBH0 211 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 SOHLH2Q9NX45 425 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 LRIT1Q9P2V4 623 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 KPTNQ9Y664 436 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 PCDH15Q96QU1 1955 aa12.57□□□□□ -0.4
RABGGTA-220ENST00000560998 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SYNDIG1LA6NDD5 238 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC34A2O95436 690 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CLPSP04118 112 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CD2P06729 351 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CLUP10909 449 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC6A6P31641 620 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 GLP1RP43220 463 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 PPM1FP49593 454 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 FHL1Q13642 323 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 NNATQ16517 81 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 DEFB133Q30KQ1 61 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 Q499Y3 187 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 BEX5Q5H9J7 111 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 PRAMEF17Q5VTA0 474 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 AWAT2Q6E213 333 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 TMEM205Q6UW68 189 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 KIRREL2Q6UWL6 708 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 GALNT16Q8N428 558 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF615Q8N8J6 731 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CADM4Q8NFZ8 388 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 TNFRSF13CQ96RJ3 184 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CHRNA10Q9GZZ6 450 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 UBE2ZQ9H832 354 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 PDE7BQ9NP56 450 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 NOP16Q9Y3C1 178 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 TRBV6-7A0A0A0MS04 114 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 METTL21EPA6NDL7 271 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 IDSB3KWA1 339 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 H0YIG0 161 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CTAG2O75638 210 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CD3DP04234 171 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CPT2P23786 658 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 ATP1B3P54709 279 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 F2RL1P55085 397 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 RAB4BP61018 213 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 DHRS2Q13268 280 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 MST1LQ2TV78 715 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 STPG1Q5TH74 334 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 ULK3Q6PHR2 472 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 OGFOD3Q6PK18 319 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 LRRTM1Q86UE6 522 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 OR4K17Q8NGC6 315 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 OR1J2Q8NGS2 313 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms