RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CPNE4Q96A23 557 aaPredicted RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 PANX2Q96RD6 677 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 C1orf21Q9H246 121 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 KCNJ16Q9NPI9 418 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 TRMT112Q9UI30 125 aaKnown RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 VANGL2Q9ULK5 521 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 KCNE3Q9Y6H6 103 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 PRR14LQ5THK1 2151 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 MAPK8IP3Q9UPT6 1336 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 PALLDQ8WX93 1383 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 ABCC9O60706 1549 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 ARPC3O15145 178 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 ZNF73O43830 326 aaPredicted RBP0.35□□□□□ -2.35
FOXN3-216ENST00000557496 LCA5LO95447 670 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 CLDN9O95484 217 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 BAG2O95816 211 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 CD1CP29017 333 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 P2RX1P51575 399 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 TWF1Q12792 350 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 TPBGQ13641 420 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 DMC1Q14565 340 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 SP6Q3SY56 376 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 PDZK1Q5T2W1 519 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 GTPBP8Q8N3Z3 284 aaPredicted RBP0.35□□□□□ -2.35
FOXN3-216ENST00000557496 IGF2BP2-AS1Q96M15 143 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 RNF145Q96MT1 663 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 SERPINB12Q96P63 405 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 RBM14Q96PK6 669 aaKnown RBP0.35□□□□□ -2.35
FOXN3-216ENST00000557496 CNN2Q99439 309 aaKnown RBP0.35□□□□□ -2.35
FOXN3-216ENST00000557496 SAMD10Q9BYL1 202 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 GCOM2Q9BZD3 368 aaPredicted RBP0.35□□□□□ -2.35
FOXN3-216ENST00000557496 DUSP21Q9H596 190 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 NMRAL1Q9HBL8 299 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 RHBDL2Q9NX52 303 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 IL37Q9NZH6 218 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 ATP10AO60312 1499 aa0.35□□□□□ -2.35
FOXN3-216ENST00000557496 IGLV1-36A0A0B4J1U3 117 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 A0A1B0GUH1 482 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 RGSL1A5PLK6 1076 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 GABRR3A8MPY1 467 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 D6RAR5 112 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 L7N2F9 121 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 SOX15O60248 233 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 OR7C2O60412 319 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 SURF6O75683 361 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 CPSF4O95639 269 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 DIRAS3O95661 229 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 EPB41P11171 864 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 GAP43P17677 238 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 ACOT2P49753 483 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 UBE2E1P51965 193 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF141Q15928 474 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 TPD52L1Q16890 204 aaPredicted RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 DAZ4Q86SG3 579 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 TMEM25Q86YD3 366 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 OR4M1Q8NGD0 313 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF502Q8TBZ5 544 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 UBE2Q2Q8WVN8 375 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 SENP8Q96LD8 212 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 GPR82Q96P67 336 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 MARVELD1Q9BSK0 173 aa0.34□□□□□ -2.36
FOXN3-216ENST00000557496 DAZ1Q9NQZ3 744 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 FARSBQ9NSD9 589 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 RPRD2Q5VT52 1461 aaKnown RBP0.34□□□□□ -2.36
FOXN3-216ENST00000557496 TSPOAP1O95153 1857 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF816-ZNF321PA0A0X1KG74 233 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 GOLGA6L4A6NEF3 574 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 C15orf65H3BRN8 121 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 DNALI1O14645 258 aaPredicted RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 GOSR2O14653 212 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 PRPSAP2O60256 369 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 SEMA3DO95025 777 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 MMP7P09237 267 aaPredicted RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 CD28P10747 220 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 CD37P11049 281 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ATP6V1C1P21283 382 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 RPL23P62829 140 aaKnown RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ACTG2P63267 376 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ELF3P78545 371 aaPredicted RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 PRR3P79522 188 aaKnown RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 FMODQ06828 376 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 PPIDQ08752 370 aaKnown RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 SIGLEC14Q08ET2 396 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ECH1Q13011 328 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF77Q15935 545 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 SLC36A3Q495N2 470 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 NKAIN4Q8IVV8 208 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 COX18Q8N8Q8 333 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 TRPV1Q8NER1 839 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 DCPSQ96C86 337 aaKnown RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 TRIM44Q96DX7 344 aaPredicted RBP0.33□□□□□ -2.36
FOXN3-216ENST00000557496 PLEKHA8Q96JA3 519 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 AZI2Q9H6S1 392 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 POLE4Q9NR33 117 aa0.33□□□□□ -2.36
FOXN3-216ENST00000557496 IGKV1-8A0A0C4DH67 115 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 NDUFC2-KCTD14E9PQ53 114 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 H7C417 338 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 DYNC1I1O14576 645 aa0.32□□□□□ -2.36
FOXN3-216ENST00000557496 ZNF208O43345 1280 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms