RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 KLHL21Q9UJP4 597 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ADAM18Q9Y3Q7 739 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 POLEQ07864 2286 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 PCNX3Q9H6A9 2034 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF407Q9C0G0 2248 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 KIAA1549Q9HCM3 1950 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 BSNQ9UPA5 3926 aa5.04□□□□□ -1.6
SCAF11-213ENST00000550629 SPENQ96T58 3664 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 TEX13CA0A0J9YWL9 993 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SLC22A23A1A5C7 686 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PRSS37A4D1T9 235 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 DNAJC9-AS1A6NH13 148 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 KDM4EB2RXH2 506 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF587BE7ETH6 402 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RPL36A-HNRNPH2H7BZ11 118 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 DLGAP1O14490 977 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SURF4O15260 269 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MPZL2O60487 215 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SNAP29O95721 258 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RENP00797 406 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PLA2G2AP14555 144 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF3P17036 446 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PAICSP22234 425 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CRABP1P29762 137 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 GGT2P36268 569 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ACVR1BP36896 505 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 UQCRFS1P47985 274 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CSNK1A1P48729 337 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CENPAP49450 140 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 BLVRAP53004 296 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SLC25A1P53007 311 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CDC42P60953 191 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SNRPGP62308 76 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 EFNB1P98172 346 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 TGFBR3Q03167 851 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 LRRC36Q1X8D7 754 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MESTQ5EB52 335 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 C12orf73Q69YU5 71 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NIPAL3Q6P499 406 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 DNM1P34Q6PK57 102 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CASP12Q6UXS9 341 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 TFAP2EQ6VUC0 442 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SSX8Q7RTT4 187 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NUFIP2Q7Z417 695 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 IGFN1Q86VF2 1251 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 FJX1Q86VR8 437 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 GCNT2Q8N0V5 402 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 GPR137CQ8N3F9 429 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 GALNT4Q8N4A0 578 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RPRMLQ8N4K4 120 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NAXEQ8NCW5 288 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF555Q8NEP9 628 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NOXO1Q8NFA2 376 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 OR8J1Q8NGP2 316 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 OR6N1Q8NGY5 312 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 OR2T4Q8NH00 348 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 OR4Q3Q8NH05 313 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 LILRB4Q8NHJ6 448 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NMD3Q96D46 503 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 LRRC46Q96FV0 321 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PLEKHA8Q96JA3 519 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 Q96M85 177 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RBP7Q96R05 134 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MBOAT4Q96T53 435 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 APOL4Q9BPW4 351 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 HDHD5Q9BXW7 423 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 NMNAT2Q9BZQ4 307 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RIBC2Q9H4K1 309 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 FAM118AQ9NWS6 357 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 MED29Q9NX70 200 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 GLTPQ9NZD2 209 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 IL20RAQ9UHF4 553 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SH3BGRL2Q9UJC5 107 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF346Q9UL40 294 aaKnown RBP5.03□□□□□ -1.6
SCAF11-213ENST00000550629 CLEC4AQ9UMR7 237 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 PROCRQ9UNN8 238 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 RNF6Q9Y252 685 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 IER3IP1Q9Y5U9 82 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 HSPE1-MOB4S4R3N1 261 aa5.03□□□□□ -1.6
SCAF11-213ENST00000550629 SMG1Q96Q15 3661 aaKnown RBP5.02□□□□□ -1.61
SCAF11-213ENST00000550629 TENM4Q6N022 2769 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 LOC100130705A0A1B0GUX0 176 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 CLEC18AA5D8T8 446 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 A8MXE2 369 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 J3QKU1 62 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 ARHGEF9O43307 516 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 TRMUO75648 421 aaKnown RBP5.02□□□□□ -1.61
SCAF11-213ENST00000550629 SERPINI2O75830 405 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 KRT33AO76009 404 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 SCGB1D2O95969 90 aa5.02□□□□□ -1.61
SCAF11-213ENST00000550629 IGFBP1P08833 259 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-213ENST00000550629 HIST1H1CP16403 213 aaKnown RBP5.02□□□□□ -1.61
SCAF11-213ENST00000550629 COX5AP20674 150 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms