RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SLC25A18Q9H1K4 315 aa7.14□□□□□ -1.27
VPS13D-211ENST00000543710 ARFGEF1Q9Y6D6 1849 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ABCD4O14678 606 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ALOX12BO75342 701 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SERPINA7P05543 415 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 GRPRP30550 384 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ISL1P61371 349 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF766Q5HY98 468 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 METRNLQ641Q3 311 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 C12orf54Q6X4T0 127 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 FAM57BQ71RH2 274 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 DOK1Q99704 481 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 RBM24Q9BX46 236 aaKnown RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SAMD10Q9BYL1 202 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 C11orf54Q9H0W9 315 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 PLEK2Q9NYT0 353 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 TIMM10BQ9Y5J6 103 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 KNG1P01042 644 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 PDGFAP04085 211 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 GP1BAP07359 652 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF883P0CG24 379 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 AADACL3Q5VUY0 350 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 TRILQ7L0X0 811 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 LYG2Q86SG7 212 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 CALHM3Q86XJ0 350 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF808Q8N4W9 903 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SLC35G3Q8N808 338 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 GATSQ8NAP1 163 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 DYNC2LI1Q8TCX1 351 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 FGF14Q92915 247 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 MSLNLQ96KJ4 702 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 OXGR1Q96P68 337 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SUCNR1Q9BXA5 334 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ACTR3CQ9C0K3 210 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SLC6A17Q9H1V8 727 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 METTL17Q9H7H0 456 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ERVMER34-1Q9H9K5 563 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 RANGRFQ9HD47 186 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 NOSIPQ9Y314 301 aaKnown RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 PPIL1Q9Y3C6 166 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 TRAV27A0A087WT01 109 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 A0A1B0GTQ1 180 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SLC25A17O43808 307 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 CD79AP11912 226 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 BAXQ07812 192 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 PMPCAQ10713 525 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 GTDC1Q4AE62 458 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 NKAIN1Q4KMZ8 207 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SOWAHCQ53LP3 525 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 FBXW12Q6X9E4 464 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 PGBD5Q8N414 524 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 NPEPL1Q8NDH3 523 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SLC39A9Q9NUM3 307 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 BHLHE40O14503 412 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SNCGO76070 127 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 APOA2P02652 100 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 SERPINA2P20848 420 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 DIO1P49895 249 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 TMEM196Q5HYL7 178 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 C1orf140Q5VVS0 124 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ELP2Q6IA86 826 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 IL20RBQ6UXL0 311 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 C17orf107Q6ZR85 190 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF761Q86XN6 746 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-211ENST00000543710 STPG2Q8N412 459 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF385DQ9H6B1 395 aa7.13□□□□□ -1.27
VPS13D-211ENST00000543710 AKAP11Q9UKA4 1901 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 H0YGG7 62 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 NSA2O95478 260 aaKnown RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PRR35P0CG20 571 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SNCAP37840 140 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SSPNQ14714 243 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 TIGITQ495A1 244 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CLLU1Q5K131 121 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 VASH2Q86V25 355 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ADGRG3Q86Y34 549 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 OR13C2Q8NGS9 318 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 FAM71F1Q96KD3 344 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MRGPRX1Q96LB2 322 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 C2orf50Q96LR7 162 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 TRIB1Q96RU8 372 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 NRASP01111 189 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 IL2RGP31785 369 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 HTR5AP47898 357 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ASCL1P50553 236 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZNF136P52737 540 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 PITX1P78337 314 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 CSNK1G2P78368 415 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 FUT7Q11130 342 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 SLC25A30Q5SVS4 291 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ATPAF1Q5TC12 328 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-211ENST00000543710 LAX1Q8IWV1 398 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 ZFP41Q8N8Y5 198 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 OR52H1Q8NGJ2 320 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GPR78Q96P69 363 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 GLIPR2Q9H4G4 154 aa7.12□□□□□ -1.27
VPS13D-211ENST00000543710 MRPL15Q9P015 296 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms