RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MARCH3Q86UD3 253 aa17.63■□□□□ 0.41
SUDS3-204ENST00000543473 WDR5BQ86VZ2 330 aa17.63■□□□□ 0.41
SUDS3-204ENST00000543473 JAM3Q9BX67 310 aa17.63■□□□□ 0.41
SUDS3-204ENST00000543473 NXF2Q9GZY0 626 aaKnown RBP17.63■□□□□ 0.41
SUDS3-204ENST00000543473 RHOFQ9HBH0 211 aa17.63■□□□□ 0.41
SUDS3-204ENST00000543473 MBNL1Q9NR56 388 aaKnown RBP17.63■□□□□ 0.41
SUDS3-204ENST00000543473 SLC39A9Q9NUM3 307 aa17.63■□□□□ 0.41
SUDS3-204ENST00000543473 ZFC3H1O60293 1989 aaKnown RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 MFAP5Q13361 173 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 CAMK2BQ13554 666 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 EMC4Q5J8M3 183 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 C1orf140Q5VVS0 124 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF425Q6IV72 752 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 Q6ZNB5 142 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 GCM1Q9NP62 436 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 SLC23A2Q9UGH3 650 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF346Q9UL40 294 aaKnown RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 EXOGQ9Y2C4 368 aaKnown RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 ASCC3Q8N3C0 2202 aaKnown RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 IGLV3-16A0A075B6K0 115 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 DPP4P27487 766 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 GABREP78334 506 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 SFRP5Q5T4F7 317 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 NHLRC1Q6VVB1 395 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 POC1BQ8TC44 478 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF724A8MTY0 619 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 CD37P11049 281 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 OR2W3Q7Z3T1 314 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 HSD17B13Q7Z5P4 300 aaPredicted RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 MUC20Q8N307 709 aaPredicted RBP17.62■□□□□ 0.41
SUDS3-204ENST00000543473 LRRC18Q8N456 261 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 IL22RA1Q8N6P7 574 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 CUTCQ9NTM9 273 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 GAB2Q9UQC2 676 aa17.62■□□□□ 0.41
SUDS3-204ENST00000543473 HPNP05981 417 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 AVPR2P30518 371 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 SELENOPP49908 381 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 TMEM182Q6ZP80 229 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 ARIH2OSQ8N7S6 290 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 TCTN2Q96GX1 697 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 PATZ1Q9HBE1 687 aaKnown RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 LRIT1Q9P2V4 623 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 FBXO4Q9UKT5 387 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 GLSO94925 669 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 CBX7O95931 251 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 GLI4P10075 376 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 MLF2Q15773 248 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 C1orf87Q8N0U7 546 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 C17orf47Q8NEP4 570 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 CCNL2Q96S94 520 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 QSER1Q2KHR3 1735 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 LOC102725191A0A1B0GVB3 256 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 SDCBPO00560 298 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 NME1P15531 152 aaKnown RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 RAB11AP62491 216 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 RPL18Q07020 188 aaKnown RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 MLC1Q15049 377 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 ADIRFQ15847 76 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 TMEM176BQ3YBM2 270 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 OR2A1Q8NGT9 310 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 ING1Q9UK53 422 aaPredicted RBP17.61■□□□□ 0.41
SUDS3-204ENST00000543473 SIGLEC7Q9Y286 467 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 ZFP92A6NM28 416 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 ACKR1Q16570 336 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 CST9LP1Q5W188 147 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 LHFPL5Q8TAF8 219 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 TMEM68Q96MH6 324 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 FOXJ3Q9UPW0 622 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 KIAA1217Q5T5P2 1943 aa17.61■□□□□ 0.41
SUDS3-204ENST00000543473 STMND1H3BQB6 276 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 MT-ND4LP03901 98 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 AKR1C3P42330 323 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 MANEAQ5SRI9 462 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 PIGTQ969N2 578 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 TP53TG5Q9Y2B4 290 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 HBG1P69891 147 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 HBG2P69892 147 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 SHEQ5VZ18 495 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 OR11H7Q8NGC8 314 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 CXorf58Q96LI9 332 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 SLC6A18Q96N87 628 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 TINAGL1Q9GZM7 467 aaPredicted RBP17.6■□□□□ 0.41
SUDS3-204ENST00000543473 KCNG2Q9UJ96 466 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 LGALSLQ3ZCW2 172 aaPredicted RBP17.6■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF705AQ6ZN79 300 aaPredicted RBP17.6■□□□□ 0.41
SUDS3-204ENST00000543473 OR6K3Q8NGY3 331 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 OR14A16Q8NHC5 309 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 SEH1LQ96EE3 360 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 FGF22Q9HCT0 170 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 MTFP1Q9UDX5 166 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 CYB5R1Q9UHQ9 305 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 NXT1Q9UKK6 140 aaKnown RBP17.6■□□□□ 0.41
SUDS3-204ENST00000543473 SLC17A2O00624 439 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 PTAFRP25105 342 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 RAB1AP62820 205 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 FXNQ16595 210 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 RNLSQ5VYX0 342 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF626Q68DY1 528 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms