RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 PCK2Q16822 640 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 SLC18B1Q6NT16 456 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 DPY19L4Q7Z388 723 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 OR51G2Q8NGK0 314 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 AKR7LQ8NHP1 331 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 CNIH3Q8TBE1 160 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 APH1BQ8WW43 257 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 RNFT2Q96EX2 444 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 MNTQ99583 582 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 NOX3Q9HBY0 568 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 PLEK2Q9NYT0 353 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 NPAP1Q9NZP6 1156 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-205ENST00000518196 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 TMEM14AQ9Y6G1 99 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 IGHV1-18A0A0C4DH31 117 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 RER1O15258 196 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 DOK2O60496 412 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
PABPC1-205ENST00000518196 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 SBK2P0C263 348 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 COX5BP10606 129 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-205ENST00000518196 RPS27P42677 84 aaKnown RBP11.28□□□□□ -0.6
PABPC1-205ENST00000518196 CSNK2BP67870 215 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 RAB35Q15286 201 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 TBC1D28Q2M2D7 210 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 KLHL22Q53GT1 634 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 CCDC92Q53HC0 331 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ELFN2Q5R3F8 820 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 NCMAPQ5T1S8 102 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF774Q6NX45 483 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 TMEM154Q6P9G4 183 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 SEZ6L2Q6UXD5 910 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 DCXRQ7Z4W1 244 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 CDC20BQ86Y33 519 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 SLC35F2Q8IXU6 374 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 PLPPR2Q96GM1 343 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF75AQ96N20 296 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ADGRL4Q9HBW9 690 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 LAMP5Q9UJQ1 280 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 TENM4Q6N022 2769 aa11.28□□□□□ -0.6
PABPC1-205ENST00000518196 ADGRG4Q8IZF6 3080 aa11.27□□□□□ -0.6
PABPC1-205ENST00000518196 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 IRGMA1A4Y4 181 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 DPRXA6NFQ7 191 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF670-ZNF695F2Z2N8 137 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 PHYHO14832 338 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CRYAAP02489 173 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CD3EP07766 207 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 LYNP07948 512 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CELA3BP08861 270 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CECR9P0C854 216 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 DBTP11182 482 aaKnown RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CD40P25942 277 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 STOMP27105 288 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 APEX1P27695 318 aaKnown RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 HTR5AP47898 357 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 NUDT6P53370 316 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF91Q05481 1191 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ECH1Q13011 328 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 TAF13Q15543 124 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 C1orf229Q6ZS94 237 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 SLC30A7Q8NEW0 376 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 FBLIM1Q8WUP2 373 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ASB17Q8WXJ9 295 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 PIK3IP1Q96FE7 263 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 COQ7Q99807 217 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 CDH20Q9HBT6 801 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 AMBNQ9NP70 447 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ATPIF1Q9UII2 106 aa11.27□□□□□ -0.61
PABPC1-205ENST00000518196 EXOGQ9Y2C4 368 aaKnown RBP11.27□□□□□ -0.61
PABPC1-205ENST00000518196 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 OR6C6A6NF89 314 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 A6NNC1 897 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 DEFB108AA8MXU0 73 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 DENRO43583 198 aaKnown RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 SYNGR3O43761 229 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 FADS2O95864 444 aaKnown RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 OR2T7P0C7T2 308 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 COL8A1P27658 744 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 SLC15A1P46059 708 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 HCCSP53701 268 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 NAAAQ02083 359 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms