RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
CCHCR1-227ENST00000508852 NPTNQ9Y639 398 aa11.53□□□□□ -0.56
CCHCR1-227ENST00000508852 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.56
CCHCR1-227ENST00000508852 SLC16A7O60669 478 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 PTP4A3O75365 173 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 TXNDC12O95881 172 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 RAC2P15153 192 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 HILS1P60008 231 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 PSME3P61289 254 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 MESTQ5EB52 335 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 FGD3Q5JSP0 725 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 TBPL2Q6SJ96 375 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 VASH1Q7L8A9 365 aaPredicted RBP11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 MUC20Q8N307 709 aaPredicted RBP11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF283Q8N7M2 679 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 GJC3Q8NFK1 279 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 SEMA6DQ8NFY4 1073 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 OR1F12Q8NHA8 337 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 HAVCR1Q96D42 359 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 ZMYND19Q96E35 227 aaPredicted RBP11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 FAM46AQ96IP4 442 aaKnown RBP11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 TMPRSS13Q9BYE2 586 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 HDHD2Q9H0R4 259 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 GORASP2Q9H8Y8 452 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 DCAF13Q9NV06 445 aaKnown RBP11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
CCHCR1-227ENST00000508852 DYSFO75923 2080 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 UNC119BA6NIH7 251 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 H7C1C5 153 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 VENTXO95231 258 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 CTLA4P16410 223 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 SELEP16581 610 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 OMPP47874 163 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 COMPP49747 757 aaPredicted RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 LCN6P62502 163 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 ACTG1P63261 375 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 SLC36A3Q495N2 470 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 SMARCD3Q6STE5 483 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 BPIFB2Q8N4F0 458 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 OR2Z1Q8NG97 314 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 GTF3AQ92664 365 aaKnown RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 POP5Q969H6 163 aaKnown RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 APOBEC3DQ96AK3 386 aaPredicted RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 MCUR1Q96AQ8 359 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 CMBLQ96DG6 245 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 COQ7Q99807 217 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 NSRP1Q9H0G5 558 aaKnown RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 NDUFAF4Q9P032 175 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 ASH2LQ9UBL3 628 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 POLR1DQ9Y2S0 133 aa11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 POLR3KQ9Y2Y1 108 aaPredicted RBP11.51□□□□□ -0.57
CCHCR1-227ENST00000508852 LOC105371242A0A075B767 164 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 IDH3BO43837 385 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 RENP00797 406 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 IGHV2-70P01814 119 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 ADRA2CP18825 462 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 SLC6A6P31641 620 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 SRP9P49458 86 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 SRSF2Q01130 221 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 ECH1Q13011 328 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 SPATS1Q496A3 300 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 FBXW12Q6X9E4 464 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 JAZF1Q86VZ6 243 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 LRRC28Q86X40 367 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 DHRS1Q96LJ7 313 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 GPA33Q99795 319 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 NDE1Q9NXR1 346 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 UBAP1Q9NZ09 502 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 ADA2Q9NZK5 511 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 MAGEL2Q9UJ55 1249 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 COA3Q9Y2R0 106 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 CACNG2Q9Y698 323 aa11.5□□□□□ -0.57
CCHCR1-227ENST00000508852 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 ARPC3O15145 178 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 FSTL3O95633 263 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 SCG5P05408 212 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 SBK2P0C263 348 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 MDH2P40926 338 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 BTG1P62324 171 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 C1orf87Q8N0U7 546 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 LINC00471Q8N535 108 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 GCDHQ92947 438 aaPredicted RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 PYURFQ96I23 114 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms