RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	ZNF607	Q96SK3	696 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	SORT1	Q99523	831 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	PAIP2	Q9BPZ3	127 aa	Known RBP	9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	CHIA	Q9BZP6	476 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	C20orf27	Q9GZN8	174 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	WDR55	Q9H6Y2	383 aa	Predicted RBP	9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	SIAE	Q9HAT2	523 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	ELOVL3	Q9HB03	270 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	NOX4	Q9NPH5	578 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	LGALS13	Q9UHV8	139 aa		9.06	□□□□□ -0.96
SKAP2-209	ENST00000497511	TRPC5OS	A6NMA1	111 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511		F5H0A9	414 aa	Predicted RBP	9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	BLOC1S5-TXNDC5	H3BN57	136 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511		H3BSA7	217 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	SDHD	O14521	159 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	PIN1P1	O15428	100 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	TYROBP	O43914	113 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	SERPINB7	O75635	380 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	MMP7	P09237	267 aa	Predicted RBP	9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	SELE	P16581	610 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	FAH	P16930	419 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	BGN	P21810	368 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	AQP1	P29972	269 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	CDA	P32320	146 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	GUCA1A	P43080	201 aa	Predicted RBP	9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ERVK-25	P63136	954 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	CDK6	Q00534	326 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZNF74	Q16587	644 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	C2orf68	Q2NKX9	166 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	TMEM255A	Q5JRV8	349 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	LCE1D	Q5T752	114 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZNF620	Q6ZNG0	422 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	MSANTD1	Q6ZTZ1	278 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	HDDC2	Q7Z4H3	204 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	COMTD1	Q86VU5	262 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ARMC8	Q8IUR7	673 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZNF283	Q8N7M2	679 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	ITLN1	Q8WWA0	313 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	RAB40A	Q8WXH6	277 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	NSMAF	Q92636	917 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	FAM71F1	Q96KD3	344 aa	Predicted RBP	9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	MCHR1	Q99705	422 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	TAS2R5	Q9NYW4	299 aa		9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	9.05	□□□□□ -0.96
SKAP2-209	ENST00000497511	LOC100509620	A0A075B734	347 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	CPSF4L	A6NMK7	179 aa	Known RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	CHP2	O43745	196 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	FMO6P	O60774	539 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SLC2A10	O95528	541 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ABHD16A	O95870	558 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	WNT2	P09544	360 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	KIT	P10721	976 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SLC6A2	P23975	617 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	DAP3	P51398	398 aa	Known RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	POLR2J	P52435	117 aa	Known RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	PSG4	Q00888	419 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	CD47	Q08722	323 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	RUNDC3A	Q59EK9	446 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	LCE4A	Q5TA78	99 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SLC27A4	Q6P1M0	643 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZNF613	Q6PF04	617 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SLC2A7	Q6PXP3	512 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511		Q6YL49	198 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	KLB	Q86Z14	1044 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	TMEM86B	Q8N661	226 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ATG16L2	Q8NAA4	619 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	OR8B3	Q8NGG8	313 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	TBC1D15	Q8TC07	691 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SSMEM1	Q8WWF3	244 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	NEIL1	Q96FI4	390 aa	Predicted RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	C4orf45	Q96LM5	186 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	MAGEB18	Q96M61	343 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	OR2V2	Q96R30	315 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	OR8B2	Q96RD0	313 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	NUDT16L1	Q9BRJ7	211 aa	Known RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	PCGF1	Q9BSM1	259 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ROPN1B	Q9BZX4	212 aa	Predicted RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	EVA1A	Q9H8M9	152 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ROPN1	Q9HAT0	212 aa	Predicted RBP	9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	SLCO1B3	Q9NPD5	702 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	MAN2C1	Q9NTJ4	1040 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZIM2	Q9NZV7	527 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	MIOX	Q9UGB7	285 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	IL19	Q9UHD0	177 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ZNF229	Q9UJW7	825 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	ANGPT4	Q9Y264	503 aa		9.04	□□□□□ -0.96
SKAP2-209	ENST00000497511	C9orf118	A6NHY6	69 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	TMEM178B	H3BS89	294 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511		M0R3H8	397 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	HDAC3	O15379	428 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	PIP5K1C	O60331	668 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	TRMU	O75648	421 aa	Known RBP	9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	MELTF	P08582	738 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	CSF1	P09603	554 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	NR2C1	P13056	603 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	ACADS	P16219	412 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	CPT2	P23786	658 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	BPIFB3	P59826	476 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	KRTAP10-3	P60369	221 aa		9.03	□□□□□ -0.96
SKAP2-209	ENST00000497511	FGF12	P61328	243 aa		9.03	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms