RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 COMTD1Q86VU5 262 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 RBM45Q8IUH3 476 aaKnown RBP1.64□□□□□ -2.15
LMNB1-207ENST00000494185 CBLN2Q8IUK8 224 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF547Q8IVP9 402 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 SYCE1Q8N0S2 351 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 KIR2DL5AQ8N109 375 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 CEND1Q8N111 149 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 FAM86B1Q8N7N1 296 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 OR2G3Q8NGZ4 309 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 OR51F2Q8NH61 342 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 KIR2DL5BQ8NHK3 375 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 TCP10LQ8TDR4 215 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 SDR42E1Q8WUS8 393 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ARPC1AQ92747 370 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ITFG2Q969R8 447 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 APH1AQ96BI3 265 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 SMIM10Q96HG1 83 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 TSSK3Q96PN8 268 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 GPR21Q99679 349 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 KCNS3Q9BQ31 491 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ACBD6Q9BR61 282 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 CALN1Q9BXU9 219 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 UGT1A7Q9HAW7 530 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 UGT1A8Q9HAW9 530 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ACP6Q9NPH0 428 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF302Q9NR11 478 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 CCL28Q9NRJ3 127 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 AGPAT4Q9NRZ5 378 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 MCUBQ9NWR8 336 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 DUX4Q9UBX2 424 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 DDX19BQ9UMR2 479 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 GAKO14976 1311 aa1.64□□□□□ -2.15
LMNB1-207ENST00000494185 PHF3Q92576 2039 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 A0A0G2JN53 185 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 H3BN98 237 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 H3BNH8 94 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PEX7O00628 323 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PLPP1O14494 284 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 RFXANKO14593 260 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 NUPL2O15504 423 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 DPM1O60762 260 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MPDU1O75352 247 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PLEKHA8P1O95397 391 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 HPRT1P00492 218 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 OXTP01178 125 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CSF3P09919 207 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CALM1P0DP23 149 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CALM2P0DP24 149 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CALM3P0DP25 149 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 F2RP25116 425 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 HRH1P35367 487 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SLC26A3P40879 764 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 APOC4P55056 127 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 FGF8P55075 233 aaPredicted RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF121P58317 390 aaPredicted RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ATP6V0D1P61421 351 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 NUTF2P61970 127 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SEMG2Q02383 582 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MXD1Q05195 221 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PSG7Q13046 419 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 UNC119Q13432 240 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 FZD2Q14332 565 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 QPRTQ15274 297 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 TSC22D1Q15714 1073 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 NSDHLQ15738 373 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 GABRA6Q16445 453 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SGCAQ16586 387 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 KCTD19Q17RG1 926 aaPredicted RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CHRFAM7AQ494W8 412 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 LRRC10Q5BKY1 277 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PDPK2PQ6A1A2 396 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 RWDD4Q6NW29 188 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 Q6ZVH6 145 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MBOAT2Q6ZWT7 520 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SPATA24Q86W54 205 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MKXQ8IYA7 352 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ENTHD1Q8IYW4 607 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 VKORC1L1Q8N0U8 176 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SYS1Q8N2H4 156 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PNKDQ8N490 385 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 OR4F15Q8NGB8 312 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ACER1Q8TDN7 264 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CACNG8Q8WXS5 425 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ANP32BQ92688 251 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM230Q96A57 120 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 RPEQ96AT9 228 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 EEF1AKMT3Q96AZ1 226 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MICU1Q9BPX6 476 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 AGMATQ9BSE5 352 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MAP1LC3CQ9BXW4 147 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 ARMC7Q9H6L4 198 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 RPF2Q9H7B2 306 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 EML4Q9HC35 981 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 MRM3Q9HC36 420 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 TREM1Q9NP99 234 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 PLSCR3Q9NRY6 295 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 CTSFQ9UBX1 484 aa1.63□□□□□ -2.15
LMNB1-207ENST00000494185 RBMX2Q9Y388 322 aaKnown RBP1.63□□□□□ -2.15
LMNB1-207ENST00000494185 SBNO1A3KN83 1393 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 PLEKHG1Q9ULL1 1385 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms