RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RBP7Q96R05 134 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 OR52B2Q96RD2 323 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 PCDHAC1Q9H158 963 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 TXNIPQ9H3M7 391 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 ACOXLQ9NUZ1 547 aa13.4□□□□□ -0.26
DDX56-210ENST00000479440 IGF2P01344 180 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 IRF2P14316 349 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 FUT1P19526 365 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 CFHR2P36980 270 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 RBM34P42696 430 aaKnown RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 MRPL19P49406 292 aaKnown RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 VSNL1P62760 191 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 SCRN3Q0VDG4 424 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 TOP3AQ13472 1001 aaPredicted RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 ENDOGQ14249 297 aaKnown RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 CYP51A1Q16850 503 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 WDR25Q64LD2 544 aaPredicted RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 DCDC5Q6ZRR9 648 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 LDLRAD3Q86YD5 345 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 RBM45Q8IUH3 476 aaKnown RBP13.39□□□□□ -0.27
DDX56-210ENST00000479440 SLC30A8Q8IWU4 369 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 OR5AS1Q8N127 324 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 ANKRD42Q8N9B4 389 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 OR10AD1Q8NGE0 317 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 PFN4Q8NHR9 129 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 TECTBQ96PL2 329 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 CDADC1Q9BWV3 514 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 IKZF5Q9H5V7 419 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 SLAMF8Q9P0V8 285 aa13.39□□□□□ -0.27
DDX56-210ENST00000479440 WNK1Q9H4A3 2382 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 TRBV5-3A0A0A0MS03 114 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 ZNF879B4DU55 563 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 G3V4G9 280 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 J3QW42 95 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 PIP5K1CO60331 668 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 TOX4O94842 621 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 RAC2P15153 192 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 NPY4RP50391 375 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 MPP2Q14168 576 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 ALG10Q5BKT4 473 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 KPRPQ5T749 579 aaPredicted RBP13.38□□□□□ -0.27
DDX56-210ENST00000479440 Q6ZPA2 131 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 MAVSQ7Z434 540 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 MOGAT3Q86VF5 341 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 OR4D11Q8NGI4 311 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 MOSPD2Q8NHP6 518 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 AENQ8WTP8 325 aaKnown RBP13.38□□□□□ -0.27
DDX56-210ENST00000479440 C10orf82Q8WW14 230 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 PTP4A1Q93096 173 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 PRSS27Q9BQR3 290 aa13.38□□□□□ -0.27
DDX56-210ENST00000479440 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
DDX56-210ENST00000479440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX56-210ENST00000479440 C22orf46C9J442 243 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 M0QX08 132 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 IGHV4-59P01825 116 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 LIPFP07098 398 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 SFTPBP07988 381 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 TSPAN19P0C672 248 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 ERFP50548 548 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 RUNDC3AQ59EK9 446 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 METTL11BQ5VVY1 283 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 DHRS7BQ6IAN0 325 aaPredicted RBP13.37□□□□□ -0.27
DDX56-210ENST00000479440 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 PATL1Q86TB9 770 aaKnown RBP13.37□□□□□ -0.27
DDX56-210ENST00000479440 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
DDX56-210ENST00000479440 SCCPDHQ8NBX0 429 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 OR8G5Q8NG78 346 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 OR13G1Q8NGZ3 307 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 SLC26A7Q8TE54 656 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 RASSF5Q8WWW0 418 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 LIPHQ8WWY8 451 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 DPAGT1Q9H3H5 408 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 C16orf95Q9H693 158 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 STARD10Q9Y365 291 aa13.37□□□□□ -0.27
DDX56-210ENST00000479440 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 H0YL77 283 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 SGCEO43556 437 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 MMP9P14780 707 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 RGS6P49758 472 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 TAS2R41P59536 307 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 RPL27P61353 136 aaKnown RBP13.36□□□□□ -0.27
DDX56-210ENST00000479440 C1orf94Q6P1W5 598 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 Q6ZSV7 163 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 CLDN22Q8N7P3 220 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 ZSCAN4Q8NAM6 433 aaPredicted RBP13.36□□□□□ -0.27
DDX56-210ENST00000479440 TMEM255BQ8WV15 326 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 ZNF582Q96NG8 517 aaPredicted RBP13.36□□□□□ -0.27
DDX56-210ENST00000479440 TBX15Q96SF7 602 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 C20orf141Q9NUB4 165 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 HIF3AQ9Y2N7 669 aa13.36□□□□□ -0.27
DDX56-210ENST00000479440 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 BTBD17A6NE02 478 aa13.35□□□□□ -0.27
DDX56-210ENST00000479440 A6NIZ1 184 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms