RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 IRF1P10914 325 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 PTGER1P34995 402 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 PHF19Q5T6S3 580 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF627Q7L945 461 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
HDAC1-206ENST00000476391 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 CASD1Q96PB1 797 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 SLCO1B1Q9Y6L6 691 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 TICRRQ7Z2Z1 1910 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 A0A087WV48 116 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF354AO60765 605 aaPredicted RBP12.47□□□□□ -0.41
HDAC1-206ENST00000476391 CSN2P05814 226 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 AKR1C4P17516 323 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 AK4P27144 223 aaPredicted RBP12.47□□□□□ -0.41
HDAC1-206ENST00000476391 DUSP8Q13202 625 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ISXQ2M1V0 245 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 OR4C11Q6IEV9 310 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 FAM166AQ6J272 317 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 LRRC18Q8N456 261 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF615Q8N8J6 731 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 GPR148Q8TDV2 347 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ADAMTS15Q8TE58 950 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 Q8WTZ3 238 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 CDS1Q92903 461 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 SLC41A2Q96JW4 573 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 COMMD4Q9H0A8 199 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 PELI2Q9HAT8 420 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 KLK13Q9UKR3 277 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 WDR45Q9Y484 360 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 TGOLN2O43493 480 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 RPP14O95059 124 aaKnown RBP12.46□□□□□ -0.41
HDAC1-206ENST00000476391 AGR2O95994 175 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 CXCL1P09341 107 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 ZNHIT3Q15649 155 aaPredicted RBP12.46□□□□□ -0.41
HDAC1-206ENST00000476391 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 SAPCD1Q5SSQ6 148 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 ADAD2Q8NCV1 583 aaKnown RBP12.46□□□□□ -0.41
HDAC1-206ENST00000476391 CNRIP1Q96F85 164 aaPredicted RBP12.46□□□□□ -0.41
HDAC1-206ENST00000476391 CNTNAP3Q9BZ76 1288 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 SLC25A31Q9H0C2 315 aa12.46□□□□□ -0.41
HDAC1-206ENST00000476391 UTRNP46939 3433 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 A0A087WZY1 265 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 A0A1B0GW64 132 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 PRR32B1ATL7 298 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 TRGC2P03986 189 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 CD37P11049 281 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 PBLDP30039 288 aaPredicted RBP12.46□□□□□ -0.42
HDAC1-206ENST00000476391 GNG10P50151 68 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 EIF2B1Q14232 305 aaKnown RBP12.46□□□□□ -0.42
HDAC1-206ENST00000476391 ODF4Q2M2E3 257 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 C17orf64Q86WR6 236 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 AMER3Q8N944 861 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 OR6K6Q8NGW6 343 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF461Q8TAF7 563 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 SLC25A43Q8WUT9 341 aaPredicted RBP12.46□□□□□ -0.42
HDAC1-206ENST00000476391 ZNRF4Q8WWF5 429 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 OVCA2Q8WZ82 227 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 WBP2Q969T9 261 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 SLC35A4Q96G79 324 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 KCNK15Q9H427 330 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 FBXL21Q9UKT6 434 aa12.46□□□□□ -0.42
HDAC1-206ENST00000476391 TMEM212A6NML5 194 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 TRGC1P0CF51 173 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 MC3RP41968 323 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 OR1G1P47890 313 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 BEX3Q00994 111 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 FHL1Q13642 323 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 SLC25A36Q96CQ1 311 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 ASCL3Q9NQ33 180 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 LUZP4Q9P127 313 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 PUS1Q9Y606 427 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 GLOD5A6NK44 160 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 OR4C45A6NMZ5 311 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 QDPRP09417 244 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 LAMP2P13473 410 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 CSNK2A2P19784 350 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 THBS4P35443 961 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 SSR2P43308 183 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 LSSP48449 732 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 DUSP2Q05923 314 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 TMEM128Q5BJH2 165 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 OPN5Q6U736 354 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 MED25Q71SY5 747 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 OR4S1Q8NGB4 309 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 RIMS4Q9H426 269 aaPredicted RBP12.45□□□□□ -0.42
HDAC1-206ENST00000476391 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 ADAP2Q9NPF8 381 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
HDAC1-206ENST00000476391 NDUFB2O95178 105 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 IL18BPO95998 194 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms