RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TLX1P31314 330 aaPredicted RBP12.38□□□□□ -0.43
NPHP4-207ENST00000470763 NAAAQ02083 359 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 KLHL26Q53HC5 615 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 JAGN1Q8N5M9 183 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 PRRT1Q99946 306 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 TAS2R4Q9NYW5 299 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 DAPP1Q9UN19 280 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 NOTCH4Q99466 2003 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 FBXO24O75426 580 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 ADAP1O75689 374 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF432O94892 652 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 IL2RAP01589 272 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CD2P06729 351 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 AWAT1Q58HT5 328 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CDPF1Q6NVV7 123 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 SLC43A2Q8N370 569 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 OR5T3Q8NGG3 340 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
NPHP4-207ENST00000470763 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 DCBLD2Q96PD2 775 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 M0R036 132 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 EFSO43281 561 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 IGHV2-5P01817 119 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 MAOAP21397 527 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 HRH1P35367 487 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-207ENST00000470763 SPOCK1Q08629 439 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 EBPQ15125 230 aaKnown RBP12.37□□□□□ -0.43
NPHP4-207ENST00000470763 SGCAQ16586 387 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 DRAM2Q6UX65 266 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 TRAPPC6BQ86SZ2 158 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FJX1Q86VR8 437 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 STACQ99469 402 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 IER2Q9BTL4 223 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 GGACTQ9BVM4 153 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 MRPS2Q9Y399 296 aaKnown RBP12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ARG1P05089 322 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 NME1P15531 152 aaKnown RBP12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ALOX5APP20292 161 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 TACR3P29371 465 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 RASGEF1BQ0VAM2 473 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FCRL6Q6DN72 434 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 TMEM225Q6GV28 225 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FAM166AQ6J272 317 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 DGAT2L6Q6ZPD8 337 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FOXRED2Q8IWF2 684 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 SAMD14Q8IZD0 417 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-207ENST00000470763 OR51F2Q8NH61 342 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 TMEM41AQ96HV5 264 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 SMIM8Q96KF7 97 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 FN3KRPQ9HA64 309 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 BRWD1Q9NSI6 2320 aa12.37□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF729A6NN14 1252 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 PRAMEF26H0Y7S4 382 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 EIF1AYO14602 144 aaKnown RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 B3GALT2O43825 422 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 PNPP00491 289 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 PLGP00747 810 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 RHOP08100 348 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 OR8U9P0C7N5 309 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SLC35G6P0C7Q6 338 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SELLP14151 372 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 P2RY2P41231 377 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 EIF1AXP47813 144 aaKnown RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 CLINT1Q14677 625 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 ITPRIPL2Q3MIP1 535 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 GATSQ8NAP1 163 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 CHST4Q8NCG5 386 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 OR52R1Q8NGF1 315 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 OR8U1Q8NH10 309 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 A0A087WUJ7 227 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3DA0A087WVF3 549 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3IA0A087WXS9 549 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3LB9A6J9 549 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 CD5P06127 495 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 TBC1D3HP0C7X1 549 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 RAB5AP20339 215 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 LAP3P28838 519 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SKP2Q13309 424 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 MEP1BQ16820 701 aa12.36□□□□□ -0.43
NPHP4-207ENST00000470763 PNLIPRP3Q17RR3 467 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms