RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 LOC100509620A0A075B734 347 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ARPC4-TTLL3A0A0A6YYG9 625 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 TMEM129A0AVI4 362 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 CIB4A0PJX0 185 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 C5orf63A6NC05 138 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 METTL15A6NJ78 407 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OR5H1A6NKK0 313 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF670-ZNF695F2Z2N8 137 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 C16orf97H3BN30 126 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 J3QLW9 94 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 PSMD9O00233 223 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 DVL2O14641 736 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SYNGR3O43761 229 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ICMTO60725 284 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF254O75437 659 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SULT1C4O75897 302 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 INMTO95050 263 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 AGFG2O95081 481 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ABHD16AO95870 558 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 WNT11O96014 354 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 PNPP00491 289 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 PTHP01270 115 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SERPINA5P05154 406 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 LCKP06239 509 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 THBDP07204 575 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SPARCP09486 303 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 B4GALT1P15291 398 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 CBR1P16152 277 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF19P17023 458 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF32P17041 273 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 AGAP20933 346 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OTX1P32242 354 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 DCTDP32321 178 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 UGT2B10P36537 528 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ARR3P36575 388 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OPRL1P41146 370 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ALDH3B2P48448 385 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 GTF2A1P52655 376 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 SH3BGRP55822 239 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 TGFBR3Q03167 851 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 EGR3Q06889 387 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 TFF3Q07654 80 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ACSM1Q08AH1 577 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 TPBGQ13641 420 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 EIF2B1Q14232 305 aaKnown RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 SPHARQ15513 63 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 PABPC1L2AQ5JQF8 200 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ELFN2Q5R3F8 820 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SYT6Q5T7P8 510 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 LCN1P1Q5VSP4 162 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 UBE2UQ5VVX9 321 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 LIPNQ5VXI9 398 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 FDX2Q6P4F2 183 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 TMEM154Q6P9G4 183 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 XKRXQ6PP77 449 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF322Q6U7Q0 402 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 PLEKHG7Q6ZR37 379 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 COLCA1Q6ZS62 124 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 BHLHA15Q7RTS1 189 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 SLC16A14Q7RTX9 510 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 PRSS45Q7RTY3 260 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 P2RY8Q86VZ1 359 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF584Q8IVC4 421 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF679Q8IYX0 411 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SYS1Q8N2H4 156 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 FAM169BQ8N8A8 192 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 C1orf162Q8NEQ5 155 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 OR10H4Q8NGA5 316 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OR2AJ1Q8NGZ0 328 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OR52N1Q8NH53 320 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 AKR7LQ8NHP1 331 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SPRYD4Q8WW59 207 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 ITLN2Q8WWU7 325 aaPredicted RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 ASB5Q8WWX0 329 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 EDARADDQ8WWZ3 215 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ASB17Q8WXJ9 295 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 RORBQ92753 470 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SLAMF6Q96DU3 332 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 COG8Q96MW5 612 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 WFIKKN1Q96NZ8 548 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OR8B4Q96RC9 309 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 C1QTNF6Q9BXI9 259 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 OR2H1Q9GZK4 316 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 CCDC90BQ9GZT6 254 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 C1orf198Q9H425 327 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 CCNB1IP1Q9NPC3 277 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ISYNA1Q9NPH2 558 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 CENPMQ9NSP4 180 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ZNF319Q9P2F9 582 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 ASH2LQ9UBL3 628 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 LAMP5Q9UJQ1 280 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 BLOC1S6Q9UL45 172 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 SLC5A6Q9Y289 635 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 EXOSC1Q9Y3B2 195 aaKnown RBP5.18□□□□□ -1.58
USP39-213ENST00000467885 SLC25A15Q9Y619 301 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 TMEM14AQ9Y6G1 99 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 MPDZO75970 2070 aa5.18□□□□□ -1.58
USP39-213ENST00000467885 hCG_2014768A0A024R1R8 64 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 A0A1W2PR80 420 aa5.17□□□□□ -1.58
USP39-213ENST00000467885 NKX2-6A6NCS4 301 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms