RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NKPD1Q17RQ9 610 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ALKBH6Q3KRA9 238 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 CCDC92Q53HC0 331 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF362Q5T0B9 420 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 HIST2H3PS2Q5TEC6 136 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 SLC18B1Q6NT16 456 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 SLC27A4Q6P1M0 643 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 CORO6Q6QEF8 472 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 UNQ6126/PRO20091Q6UXV3 157 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 HIST2H3AQ71DI3 136 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 GJC3Q8NFK1 279 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 OR51L1Q8NGJ5 315 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 SLC7A6Q92536 515 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 FAM168AQ92567 244 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 RHNO1Q9BSD3 238 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 REG4Q9BYZ8 158 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ELOVL3Q9HB03 270 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 MYOZ1Q9NP98 299 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 CMC2Q9NRP2 79 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 MRPL22Q9NWU5 206 aaKnown RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 EIF3KQ9UBQ5 218 aaKnown RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 COMMD3-BMI1R4GMX3 469 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 A0A096LNT2 108 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 H3BSA7 217 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 HEXAP06865 529 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 FCGR1AP12314 374 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 OSMP13725 252 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 SLC25A16P16260 332 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 SPI1P17947 270 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 PRKACGP22612 351 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 POU1F1P28069 291 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 GGT2P36268 569 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 PDLIM4P50479 330 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 SELENOVP59797 346 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 PPP1CBP62140 327 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 ELFN2Q5R3F8 820 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 CLEC9AQ6UXN8 241 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 C1orf174Q8IYL3 243 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 OR1F12Q8NHA8 337 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 OR5K1Q8NHB7 308 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 ZNRF4Q8WWF5 429 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 NEU4Q8WWR8 484 aaPredicted RBP11.05□□□□□ -0.64
COL5A1-206ENST00000465877 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 NRBF2Q96F24 287 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 DUS3LQ96G46 650 aaKnown RBP11.05□□□□□ -0.64
COL5A1-206ENST00000465877 C4orf45Q96LM5 186 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 COQ7Q99807 217 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 NMNAT2Q9BZQ4 307 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 OR2J1Q9GZK6 312 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 MS4A5Q9H3V2 200 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 TAAR3PQ9P1P4 343 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 AP4S1Q9Y587 144 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
COL5A1-206ENST00000465877 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
COL5A1-206ENST00000465877 TVP23AA6NH52 213 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 NDUFS8O00217 210 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 EBAG9O00559 213 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 NGFP01138 241 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 DBHP09172 617 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 CLUP10909 449 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 NAT2P11245 290 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 PSKH1P11801 424 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 DAOP14920 347 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF823P16415 610 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF23P17027 643 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 FASP25445 335 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 GCH1P30793 250 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 MPV17P39210 176 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 RPS27P42677 84 aaKnown RBP11.04□□□□□ -0.64
COL5A1-206ENST00000465877 SLC25A1P53007 311 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 CARTPTQ16568 116 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF718Q3SXZ3 478 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 MBNL2Q5VZF2 373 aaKnown RBP11.04□□□□□ -0.64
COL5A1-206ENST00000465877 FAHD1Q6P587 224 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 ARL9Q6T311 187 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 OR6K6Q8NGW6 343 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 OR2AJ1Q8NGZ0 328 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 KLF14Q8TD94 323 aaPredicted RBP11.04□□□□□ -0.64
COL5A1-206ENST00000465877 MARS2Q96GW9 593 aaKnown RBP11.04□□□□□ -0.64
COL5A1-206ENST00000465877 PIMREGQ9BSJ6 248 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 GABARAPL1Q9H0R8 117 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 POFUT1Q9H488 388 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 SLC25A19Q9HC21 320 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 PAPOLBQ9NRJ5 636 aaKnown RBP11.04□□□□□ -0.64
COL5A1-206ENST00000465877 TBCCD1Q9NVR7 557 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 SLCO1C1Q9NYB5 712 aa11.04□□□□□ -0.64
COL5A1-206ENST00000465877 J3QW42 95 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 SURF4O15260 269 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms