RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 IGKV3-15P01624 115 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 RPN2P04844 631 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 TPM3P06753 285 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 HOXC4P09017 264 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 CSF3P09919 207 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 IL32P24001 234 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 AK4P27144 223 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 FGF8P55075 233 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 REG3AQ06141 175 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 ARFRP1Q13795 201 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 COTL1Q14019 142 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 FZD2Q14332 565 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 ATP6V1FQ16864 119 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 ZNF470Q6ECI4 717 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 CD300LGQ6UXG3 332 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 PEX26Q7Z412 305 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 UNC93AQ86WB7 457 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR5AR1Q8NGP9 310 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR51E1Q8TCB6 317 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 APH1BQ8WW43 257 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 CENPNQ96H22 339 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 SH3GL3Q99963 347 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 DEFB126Q9BYW3 111 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 C1orf198Q9H425 327 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 ARMC7Q9H6L4 198 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 VCX3AQ9NNX9 186 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 SH2D2AQ9NP31 389 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 TMEM9BQ9NQ34 198 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 CCL28Q9NRJ3 127 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 TNFRSF19Q9NS68 423 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 MARCH5Q9NX47 278 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 MS4A12Q9NXJ0 267 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 SLC17A7Q9P2U7 560 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 CLEC2DQ9UHP7 191 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 MRM2Q9UI43 246 aaKnown RBP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 AQRO60306 1485 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 COL22A1Q8NFW1 1626 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 HACD1B0YJ81 288 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CALUO43852 315 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CBR3O75828 277 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SERF1AO75920 110 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CDK14O94921 469 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 C6orf47O95873 294 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 TIMP1P01033 207 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CST4P01036 141 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 HPGDP15428 266 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 GABRG2P18507 467 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 GGT1P19440 569 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 COX7A1P24310 79 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 HRH1P35367 487 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 PAFAH1B2P68402 229 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SLC35B1P78383 322 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SEMG2Q02383 582 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 ZNF45Q02386 682 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 UNC119Q13432 240 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 AQP6Q13520 282 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 APOBEC3HQ6NTF7 200 aaKnown RBP3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 C17orf78Q8N4C9 275 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 WDR31Q8NA23 367 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR4F15Q8NGB8 312 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR6N2Q8NGY6 317 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CDKL2Q92772 493 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 ARL5BQ96KC2 179 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SCGB3A2Q96PL1 93 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 UQCC2Q9BRT2 126 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 CALN1Q9BXU9 219 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 NDEL1Q9GZM8 345 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SYT4Q9H2B2 425 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 SLC25A22Q9H936 323 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR2S2Q9NQN1 319 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 UBAP1Q9NZ09 502 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 ADAMTS9Q9P2N4 1935 aa3.64□□□□□ -1.83
HMGB1P26-201ENST00000452520 TRAV39A0A0B4J263 110 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 TVP23AA6NH52 213 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 FAM166BA8MTA8 275 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 K7EN84 100 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 TNFSF11O14788 317 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 HPRT1P00492 218 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 GFAPP14136 432 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 PRKAR2BP31323 418 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 FABP6P51161 128 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 DIO3P55073 304 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 PMS2P3Q13401 168 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 ZSCAN26Q16670 478 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 WDR82Q6UXN9 313 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 RALGPS2Q86X27 583 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 CDKL3Q8IVW4 592 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 MREGQ8N565 214 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 ZNF525Q8N782 197 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 SNX31Q8N9S9 440 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR52E2Q8NGJ4 325 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 OR1N2Q8NGR9 330 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 C7orf33Q8WU49 177 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 TMEM230Q96A57 120 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 FAM3DQ96BQ1 224 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
HMGB1P26-201ENST00000452520 GABARAPL3Q9BY60 117 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms