RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 OR1F12Q8NHA8 337 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 DOK1Q99704 481 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 MRPL37Q9BZE1 423 aaKnown RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 HDHD2Q9H0R4 259 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 MED20Q9H944 212 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 EIF3KQ9UBQ5 218 aaKnown RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 GDF2Q9UK05 429 aaPredicted RBP17.55■□□□□ 0.4
CLDN3-201ENST00000395145 COMMD3-BMI1R4GMX3 469 aa17.55■□□□□ 0.4
CLDN3-201ENST00000395145 TVP23AA6NH52 213 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 EPHA2P29317 976 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 PPOXP50336 477 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 TEX30Q5JUR7 227 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 ELFN2Q5R3F8 820 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 SLX4IPQ5VYV7 408 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 RGS7BPQ6MZT1 257 aaPredicted RBP17.54■□□□□ 0.4
CLDN3-201ENST00000395145 ZNF101Q8IZC7 436 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 OR2AJ1Q8NGZ0 328 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 PLEKHA8Q96JA3 519 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 C4orf45Q96LM5 186 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 COQ7Q99807 217 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 CDADC1Q9BWV3 514 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 GABARAPL3Q9BY60 117 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 PRRG3Q9BZD7 231 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 BARX1Q9HBU1 254 aaPredicted RBP17.54■□□□□ 0.4
CLDN3-201ENST00000395145 HINT3Q9NQE9 182 aaKnown RBP17.54■□□□□ 0.4
CLDN3-201ENST00000395145 USE1Q9NZ43 259 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 F8P00451 2351 aa17.54■□□□□ 0.4
CLDN3-201ENST00000395145 GLCEO94923 617 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 IGHV4-39P01824 125 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ALPLP05186 524 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ZNF250P15622 560 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ENTPD1P49961 510 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 SNAPC1Q16533 368 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 C12orf73Q69YU5 71 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 PLBD1Q6P4A8 553 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ARL9Q6T311 187 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 CFAP77Q6ZQR2 320 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 TGIF2LYQ8IUE0 185 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 CPOQ8IVL8 374 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 LINC00346Q8IVM7 164 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 PQLC1Q8N2U9 271 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ZNF511Q8NB15 262 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 WFDC11Q8NEX6 87 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 OR6K6Q8NGW6 343 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 DCLRE1CQ96SD1 692 aaKnown RBP17.53■□□□□ 0.4
CLDN3-201ENST00000395145 OR51B6Q9H340 312 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 WDR76Q9H967 626 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 MARCH7Q9H992 704 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 ELOVL3Q9HB03 270 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 PNRC2Q9NPJ4 139 aaKnown RBP17.53■□□□□ 0.4
CLDN3-201ENST00000395145 TVP23BQ9NYZ1 205 aa17.53■□□□□ 0.4
CLDN3-201ENST00000395145 IGLV3-9A0A075B6K5 115 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 PRODHO43272 600 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 NDUFS7O75251 213 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 LCKP06239 509 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 PSKH1P11801 424 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 ERVS71-1P61550 626 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 KRTAP27-1Q3LI81 207 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 RFPL4BQ6ZWI9 263 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 OR1J1Q8NGS3 322 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 IPCEF1Q8WWN9 437 aaPredicted RBP17.52■□□□□ 0.4
CLDN3-201ENST00000395145 OTULINQ96BN8 352 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 TBCCD1Q9NVR7 557 aa17.52■□□□□ 0.4
CLDN3-201ENST00000395145 FLNAP21333 2647 aaKnown RBP17.52■□□□□ 0.4
CLDN3-201ENST00000395145 H3BSA7 217 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 EI24O14681 340 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 ABHD16AO95870 558 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 SLC2A5P22732 501 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 GSTT1P30711 240 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 EFNB1P98172 346 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 ECH1Q13011 328 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 SLC35D3Q5M8T2 416 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 CXXC5Q7LFL8 322 aaKnown RBP17.51■□□□□ 0.39
CLDN3-201ENST00000395145 LRP11Q86VZ4 500 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 ABHD4Q8TB40 342 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 SYNPRQ8TBG9 265 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 SLC7A6Q92536 515 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 STMN2Q93045 179 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 MAP6Q96JE9 813 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 PITX2Q99697 317 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 SYT3Q9BQG1 590 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 OR51V1Q9H2C8 321 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 FZR1Q9UM11 496 aa17.51■□□□□ 0.39
CLDN3-201ENST00000395145 ZNF469Q96JG9 3925 aaPredicted RBP17.51■□□□□ 0.39
CLDN3-201ENST00000395145 J3QW42 95 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 ZNF593O00488 134 aaPredicted RBP17.5■□□□□ 0.39
CLDN3-201ENST00000395145 PRKYO43930 277 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 NGFP01138 241 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 DBHP09172 617 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 TUBG1P23258 451 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 RPS27P42677 84 aaKnown RBP17.5■□□□□ 0.39
CLDN3-201ENST00000395145 ALDH3A2P51648 485 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 KLF3P57682 345 aaPredicted RBP17.5■□□□□ 0.39
CLDN3-201ENST00000395145 PPP1CBP62140 327 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 RSPO1Q2MKA7 263 aaPredicted RBP17.5■□□□□ 0.39
CLDN3-201ENST00000395145 TIGD4Q8IY51 512 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 BBS1Q8NFJ9 593 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 OR10S1Q8NGN2 331 aa17.5■□□□□ 0.39
CLDN3-201ENST00000395145 MARS2Q96GW9 593 aaKnown RBP17.5■□□□□ 0.39
CLDN3-201ENST00000395145 INTS14Q96SY0 518 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms