RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 A0A1B0GUH1 482 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 YKT6O15498 198 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 TRAF3IP2O43734 574 aaPredicted RBP16.68■□□□□ 0.26
USP49-202ENST00000373010 PRAF2O60831 178 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 NDUFB6O95139 128 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 LAP3P28838 519 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 CDAP32320 146 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 SNTA1Q13424 505 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 DEGS2Q6QHC5 323 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 FAM198BQ6UWH4 519 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 FADS6Q8N9I5 356 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 SEC61A2Q9H9S3 476 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 FAM206AQ9NX38 181 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 CYB5R1Q9UHQ9 305 aa16.68■□□□□ 0.26
USP49-202ENST00000373010 LOC102723996A0A087X1L8 192 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 IGHV1-45A0A0A0MS14 117 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 ARPC4-TTLL3A0A0A6YYG9 625 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 ICMTO60725 284 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 PGA4P0DJD7 388 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 PGA3P0DJD8 388 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 HTR2BP41595 481 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 TMEM244Q5VVB8 128 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 METTL11BQ5VVY1 283 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 OR10K2Q6IF99 312 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 CFAP77Q6ZQR2 320 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 CREB3L2Q70SY1 520 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 NOXO1Q8NFA2 376 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 ANKRD34BA5PLL1 514 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 MASP2O00187 686 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 NTN3O00634 580 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 LAMTOR5O43504 91 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 KLK3P07288 261 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 ACSM4P0C7M7 580 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 THEM4Q5T1C6 240 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 GLDNQ6ZMI3 551 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 NLRC3Q7RTR2 1065 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 MAML2Q8IZL2 1156 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 ZNF436Q9C0F3 470 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 METTL17Q9H7H0 456 aaPredicted RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 SLC17A5Q9NRA2 495 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 EMC3Q9P0I2 261 aa16.67■□□□□ 0.26
USP49-202ENST00000373010 NXT1Q9UKK6 140 aaKnown RBP16.67■□□□□ 0.26
USP49-202ENST00000373010 A0A1B0GVI7 797 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 TP53I11O14683 189 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 IGHG1P01857 330 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 TTRP02766 147 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 PRSS3P35030 304 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 MMP16P51512 607 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 ZNF627Q7L945 461 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 OR6M1Q8NGM8 313 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 FGGYQ96C11 551 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 PTGES2Q9H7Z7 377 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 LHFPL6Q9Y693 200 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 PYCARD-AS1I3L0S3 204 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 KLF7O75840 302 aaPredicted RBP16.66■□□□□ 0.26
USP49-202ENST00000373010 CSF1P09603 554 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 UBCP0CG48 685 aaKnown RBP16.66■□□□□ 0.26
USP49-202ENST00000373010 CD37P11049 281 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 COX6A1P12074 109 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 GTF2F2P13984 249 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 ANGPT1Q15389 498 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 KLHL24Q6TFL4 600 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 SEZ6L2Q6UXD5 910 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 ZNF782Q6ZMW2 699 aaPredicted RBP16.66■□□□□ 0.26
USP49-202ENST00000373010 CDH24Q86UP0 819 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 ADPRHL1Q8NDY3 354 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 DVL3Q92997 716 aaPredicted RBP16.66■□□□□ 0.26
USP49-202ENST00000373010 IMMP1LQ96LU5 166 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 C1orf198Q9H425 327 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 ZNF69Q9UC07 566 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 HS3ST3B1Q9Y662 390 aa16.66■□□□□ 0.26
USP49-202ENST00000373010 G3V3Y1 287 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 CYC1P08574 325 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 DNASE1P24855 282 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 TRIM61Q5EBN2 209 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 OR8S1Q8NH09 359 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 GPR137Q96N19 417 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 CHIAQ9BZP6 476 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 PBOV1Q9GZY1 135 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 NPDC1Q9NQX5 325 aaPredicted RBP16.65■□□□□ 0.26
USP49-202ENST00000373010 GDF2Q9UK05 429 aaPredicted RBP16.65■□□□□ 0.26
USP49-202ENST00000373010 POLR1DQ9Y2S0 133 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 NPTNQ9Y639 398 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 ERVH48-1M5A8F1 160 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 GPR85P60893 370 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 ZFP36L1Q07352 338 aaKnown RBP16.65■□□□□ 0.26
USP49-202ENST00000373010 OR4D6Q8NGJ1 314 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 OR2T35Q8NGX2 323 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 OXGR1Q96P68 337 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 UTP23Q9BRU9 249 aaKnown RBP16.65■□□□□ 0.26
USP49-202ENST00000373010 ZNF700Q9H0M5 742 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 SCP2D1Q9UJQ7 156 aa16.65■□□□□ 0.26
USP49-202ENST00000373010 MEGF11A6BM72 1044 aa16.64■□□□□ 0.25
USP49-202ENST00000373010 TOXO94900 526 aa16.64■□□□□ 0.25
USP49-202ENST00000373010 CCL3P10147 92 aa16.64■□□□□ 0.25
USP49-202ENST00000373010 FAUP35544 74 aaKnown RBP16.64■□□□□ 0.25
USP49-202ENST00000373010 CSRP2Q16527 193 aa16.64■□□□□ 0.25
USP49-202ENST00000373010 PEAR1Q5VY43 1037 aaPredicted RBP16.64■□□□□ 0.25
USP49-202ENST00000373010 ADGRE4PQ86SQ3 457 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms