RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ELOVL7A1L3X0 281 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 CEACAM18A8MTB9 384 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 H0YL77 283 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 GPR137BO60478 399 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 SHOX2O60902 331 aaPredicted RBP13.24□□□□□ -0.29
DDX55-202ENST00000354291 ADH4P08319 380 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 TSPAN19P0C672 248 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ACADSP16219 412 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 AQP2P41181 271 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 GNB2P62879 340 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
DDX55-202ENST00000354291 HSP90B2PQ58FF3 399 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ZNF101Q8IZC7 436 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 LRRC18Q8N456 261 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ZNF283Q8N7M2 679 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 NOXO1Q8NFA2 376 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 RP9Q8TA86 221 aaKnown RBP13.24□□□□□ -0.29
DDX55-202ENST00000354291 TBC1D15Q8TC07 691 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 SSMEM1Q8WWF3 244 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ASB10Q8WXI3 467 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 ZNF347Q96SE7 839 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 SEPHS2Q99611 448 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 POMT1Q9Y6A1 747 aa13.24□□□□□ -0.29
DDX55-202ENST00000354291 KIR2DS1A0A191URI9 304 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 NPIPB13A6NJU9 1138 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 NPIPB4C9JG80 1138 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 TRMUO75648 421 aaKnown RBP13.23□□□□□ -0.29
DDX55-202ENST00000354291 ZNF205O95201 554 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 OPN1MWP04001 364 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 CD55P08174 381 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 NR2C1P13056 603 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 STOMP27105 288 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 MDH2P40926 338 aaKnown RBP13.23□□□□□ -0.29
DDX55-202ENST00000354291 RPL15P61313 204 aaKnown RBP13.23□□□□□ -0.29
DDX55-202ENST00000354291 FGF12P61328 243 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 TAF11Q15544 211 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 MBNL2Q5VZF2 373 aaKnown RBP13.23□□□□□ -0.29
DDX55-202ENST00000354291 KCNN2Q9H2S1 579 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
DDX55-202ENST00000354291 C5orf49A4QMS7 147 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 TIMM8AO60220 97 aaPredicted RBP13.22□□□□□ -0.29
DDX55-202ENST00000354291 RPS2P15880 293 aaKnown RBP13.22□□□□□ -0.29
DDX55-202ENST00000354291 TNFSF4P23510 183 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 WNT5AP41221 380 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
DDX55-202ENST00000354291 BPIFB3P59826 476 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
DDX55-202ENST00000354291 ZMAT1Q5H9K5 638 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 PABPC1L2AQ5JQF8 200 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 C10orf128Q5T292 105 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 ARMC4Q5T2S8 1044 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 MOSPD2Q8NHP6 518 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 SGCDQ92629 289 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 RCN3Q96D15 328 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 BPIFA2Q96DR5 249 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 SAMD8Q96LT4 415 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 NUDT16L1Q9BRJ7 211 aaKnown RBP13.22□□□□□ -0.29
DDX55-202ENST00000354291 TXNIPQ9H3M7 391 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 SIAEQ9HAT2 523 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 A4GNTQ9UNA3 340 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 PLXNB1O43157 2135 aa13.22□□□□□ -0.29
DDX55-202ENST00000354291 GMNCA6NCL1 334 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 CCDC22O60826 627 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 TNFRSF1AP19438 455 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 CDK5R2Q13319 367 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 ANKDD1AQ495B1 522 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 ALG10Q5BKT4 473 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 MTX3Q5HYI7 312 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 ZNF774Q6NX45 483 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 SLC27A4Q6P1M0 643 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 Q6ZSV7 163 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 KLBQ86Z14 1044 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 MUC20Q8N307 709 aaPredicted RBP13.21□□□□□ -0.29
DDX55-202ENST00000354291 ZSCAN4Q8NAM6 433 aaPredicted RBP13.21□□□□□ -0.29
DDX55-202ENST00000354291 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 ABHD4Q8TB40 342 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 FNDC8Q8TC99 324 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 PLEKHA8Q96JA3 519 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
DDX55-202ENST00000354291 PCGF1Q9BSM1 259 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 FNDC11Q9BVV2 318 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
DDX55-202ENST00000354291 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms