RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 LOC100289279A0A1B0GTE1 492 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 GJE1A6NN92 205 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 EIF1AYO14602 144 aaKnown RBP14.83□□□□□ -0.03
SAMM50-201ENST00000350028 SERPINA7P05543 415 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 QDPRP09417 244 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 CLDN17P56750 224 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 CD83Q01151 205 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 Q0VFX4 171 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 POU4F3Q15319 338 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 TOMM20Q15388 145 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF468Q5VIY5 522 aaPredicted RBP14.83□□□□□ -0.03
SAMM50-201ENST00000350028 ANKRD16Q6P6B7 361 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 ELMOD2Q8IZ81 293 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 FAM3DQ96BQ1 224 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 SCMH1Q96GD3 660 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 DMRTB1Q96MA1 342 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 LRFN3Q9BTN0 628 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 ACTR6Q9GZN1 396 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 ING3Q9NXR8 418 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 GDF2Q9UK05 429 aaPredicted RBP14.83□□□□□ -0.03
SAMM50-201ENST00000350028 POLR1DQ9Y2S0 133 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 LHFPL6Q9Y693 200 aa14.83□□□□□ -0.03
SAMM50-201ENST00000350028 CACNA1CQ13936 2221 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 C7orf66A4D0T2 115 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 ZNF878C9JN71 531 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 G3V3Y1 287 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 MASP2O00187 686 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 ITGA5P08648 1049 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 SRD5A2P31213 254 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 EIF1AXP47813 144 aaKnown RBP14.83□□□□□ -0.04
SAMM50-201ENST00000350028 POU3F4P49335 361 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 TCF15Q12870 199 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 C2orf76Q3KRA6 126 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 CDCP2Q5VXM1 449 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 MTFR2Q6P444 385 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 DNM1P46Q6ZS02 220 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 CDH24Q86UP0 819 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 NAXDQ8IW45 347 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 OR10S1Q8NGN2 331 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 MOB1AQ9H8S9 216 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 HRASLSQ9HDD0 168 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 EMC7Q9NPA0 242 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 NUDT15Q9NV35 164 aa14.83□□□□□ -0.04
SAMM50-201ENST00000350028 P2RY10O00398 339 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 DNPH1O43598 174 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 MT-ND4P03905 459 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 YES1P07947 543 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 H2AFB2P0C5Z0 115 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 KLK2P20151 261 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 MFAP5Q13361 173 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 NOXA1Q86UR1 476 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 PRSS33Q8NF86 280 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 OR6M1Q8NGM8 313 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 SLC25A28Q96A46 364 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 FOXRED1Q96CU9 486 aaPredicted RBP14.82□□□□□ -0.04
SAMM50-201ENST00000350028 FYTTD1Q96QD9 318 aaKnown RBP14.82□□□□□ -0.04
SAMM50-201ENST00000350028 PBOV1Q9GZY1 135 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 P4HTMQ9NXG6 502 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 GLTPQ9NZD2 209 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 RCE1Q9Y256 329 aa14.82□□□□□ -0.04
SAMM50-201ENST00000350028 TRAV6A0A075B6T7 132 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 A0A0A6YYJ9 748 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 ANKRD20A5PA0PJZ0 165 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 C9orf172C9J069 976 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 CDX4O14627 284 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-201ENST00000350028 ATP6V1G1O75348 118 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 CTAG2O75638 210 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 TTRP02766 147 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 ACSM4P0C7M7 580 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 TMIGD3P0DMS9 266 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-201ENST00000350028 HTR2CP28335 458 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 GABREP78334 506 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 ACER2Q5QJU3 275 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 CFAP77Q6ZQR2 320 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 NCCRP1Q6ZVX7 275 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-201ENST00000350028 CREB3L2Q70SY1 520 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 NKAIN3Q8N8D7 197 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 KCNE4Q8WWG9 221 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 DEDD2Q8WXF8 326 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 TMEM54Q969K7 222 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 PHF21AQ96BD5 680 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 OR2M2Q96R28 347 aa14.81□□□□□ -0.04
SAMM50-201ENST00000350028 CCDC187A0A096LP49 1063 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 PMS2P1A4D2B8 440 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 GGT3PA6NGU5 568 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 NPIPA2E9PIF3 369 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 NPIPA3F8WFD2 350 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 HSD11B1P28845 292 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CDAP32320 146 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CSNK1A1P48729 337 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CCR6P51684 374 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 ZNF133P52736 654 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CAPZA1P52907 286 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 PSMA6P60900 246 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 LSM6P62312 80 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MRPS15P82914 257 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 PLA2G7Q13093 441 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 TAF13Q15543 124 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 ELFN2Q5R3F8 820 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 C1orf100Q5SVJ3 147 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms