RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 TPRA1Q86W33 373 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 LRRC18Q8N456 261 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 CPT1CQ8TCG5 803 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 PHYHIPQ92561 330 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 PRRG4Q9BZD6 226 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 PRDM14Q9GZV8 571 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 GPR35Q9HC97 309 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 PLSCR2Q9NRY7 297 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 TMEM38BQ9NVV0 291 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 RTTNQ86VV8 2226 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 TMEM269A0A1B0GVZ9 245 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 LOC110117498-PIK3R3F6TDL0 507 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 DOK2O60496 412 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 MRPL33O75394 65 aaKnown RBP18.65■□□□□ 0.58
VRK2-201ENST00000340157 IGHV3-9P01782 118 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 OCM2P0CE71 109 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 ANOS1P23352 680 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 ETV6P41212 452 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 SOX2P48431 317 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 MMP16P51512 607 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 HIST1H3AP68431 136 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 HIST2H3PS2Q5TEC6 136 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 HIST2H3AQ71DI3 136 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 RHOUQ7L0Q8 258 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 FBXO17Q96EF6 278 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 SLCO5A1Q9H2Y9 848 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 EMC3Q9P0I2 261 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 OR52A1Q9UKL2 312 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 TRBV5-7A0A0A0MS05 114 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 DCTDP32321 178 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 TNFSF8P32971 234 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 THBS2P35442 1172 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 RNPS1Q15287 305 aaKnown RBP18.65■□□□□ 0.58
VRK2-201ENST00000340157 CEACAM16Q2WEN9 425 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 SLC25A35Q3KQZ1 300 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 FAM27BQ5VT28 67 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 CHMP1BQ7LBR1 199 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.65■□□□□ 0.58
VRK2-201ENST00000340157 GPR148Q8TDV2 347 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 GFI1Q99684 422 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 ABCB9Q9NP78 766 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 SLC7A10Q9NS82 523 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 DKK4Q9UBT3 224 aa18.65■□□□□ 0.58
VRK2-201ENST00000340157 AQP7O14520 342 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 RGS5O15539 181 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 SRMP19623 302 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 GUCA1AP43080 201 aaPredicted RBP18.64■□□□□ 0.57
VRK2-201ENST00000340157 SFXN4Q6P4A7 337 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 ADGRE4PQ86SQ3 457 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 WDFY2Q96P53 400 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 SLC25A18Q9H1K4 315 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 DDX28Q9NUL7 540 aaKnown RBP18.64■□□□□ 0.57
VRK2-201ENST00000340157 CMAHPQ9Y471 501 aa18.64■□□□□ 0.57
VRK2-201ENST00000340157 PTPRQQ9UMZ3 2332 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 ANKRD61A6NGH8 418 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 K7ENP7 123 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 YES1P07947 543 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 B4GALT1P15291 398 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 RAB3BP20337 219 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 CCDC92Q53HC0 331 aaPredicted RBP18.63■□□□□ 0.57
VRK2-201ENST00000340157 INO80CQ6PI98 192 aaPredicted RBP18.63■□□□□ 0.57
VRK2-201ENST00000340157 NUFIP2Q7Z417 695 aaKnown RBP18.63■□□□□ 0.57
VRK2-201ENST00000340157 PARP16Q8N5Y8 322 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 AP3S1Q92572 193 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 FOXB1Q99853 325 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 SH3GL3Q99963 347 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 LINC00470Q9BZP3 86 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 BRD7Q9NPI1 651 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 SLC22A20A6NK97 555 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 NPR2P20594 1047 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 PSMA6P60900 246 aaKnown RBP18.63■□□□□ 0.57
VRK2-201ENST00000340157 ASPHD2Q6ICH7 369 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 SNX29P2Q8IUI4 249 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 SLC30A2Q9BRI3 323 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 ZCCHC4Q9H5U6 513 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 LHX6Q9UPM6 363 aa18.63■□□□□ 0.57
VRK2-201ENST00000340157 AK6Q9Y3D8 172 aaKnown RBP18.63■□□□□ 0.57
VRK2-201ENST00000340157 TRAV8-7A0A075B6U6 113 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 TAF4O00268 1085 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 TTRP02766 147 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 IFITM3Q01628 133 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 IDNKQ5T6J7 187 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 GJC3Q8NFK1 279 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 TMEM106AQ96A25 262 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 OCEL1Q9H607 264 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 PARPBPQ9NWS1 579 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 CLCF1Q9UBD9 225 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 ZNF175Q9Y473 711 aa18.62■□□□□ 0.57
VRK2-201ENST00000340157 SVILO95425 2214 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 ISG15P05161 165 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 SLC2A2P11168 524 aaPredicted RBP18.61■□□□□ 0.57
VRK2-201ENST00000340157 MAPK3P27361 379 aaPredicted RBP18.61■□□□□ 0.57
VRK2-201ENST00000340157 PRKXP51817 358 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 FOXG1P55316 489 aaPredicted RBP18.61■□□□□ 0.57
VRK2-201ENST00000340157 RSPO1Q2MKA7 263 aaPredicted RBP18.61■□□□□ 0.57
VRK2-201ENST00000340157 BCL2L15Q5TBC7 163 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 ZNF544Q6NX49 715 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 KLHL24Q6TFL4 600 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 ASB5Q8WWX0 329 aa18.61■□□□□ 0.57
VRK2-201ENST00000340157 PBOV1Q9GZY1 135 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms