RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SCNM1Q9BWG6 230 aa16.26■□□□□ 0.19
USP39-201ENST00000323701 ZDHHC11Q9H8X9 412 aa16.26■□□□□ 0.19
USP39-201ENST00000323701 POLR1DQ9Y2S0 133 aa16.26■□□□□ 0.19
USP39-201ENST00000323701 TRAV8-7A0A075B6U6 113 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 HSPB2A8KAH6 182 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 CDK2AP1O14519 115 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 TBX1O43435 398 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ZNF254O75437 659 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ATF1P18846 271 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 RAB3BP20337 219 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 CCR9P51686 369 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ZNF45Q02386 682 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ENDOGQ14249 297 aaKnown RBP16.25■□□□□ 0.19
USP39-201ENST00000323701 HSPB2Q16082 182 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ASPHD2Q6ICH7 369 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 AAED1Q7RTV5 226 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 TPRA1Q86W33 373 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 LRRC18Q8N456 261 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 ULBP2Q9BZM5 246 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 C1orf198Q9H425 327 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 TIGARQ9NQ88 270 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 CLEC4AQ9UMR7 237 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 R4GMQ9 66 aa16.25■□□□□ 0.19
USP39-201ENST00000323701 TMEM269A0A1B0GVZ9 245 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 TMCC2O75069 709 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 ARL6IP5O75915 188 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 IGHV3-9P01782 118 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 H2BFMP0C1H6 154 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 ADRA2CP18825 462 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 DDI2Q5TDH0 399 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 PAMR1Q6UXH9 720 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 AP3S1Q92572 193 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 TMEM106AQ96A25 262 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 COMMD4Q9H0A8 199 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 CRLF2Q9HC73 371 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 ABCB10Q9NRK6 738 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 PIEZO2Q9H5I5 2752 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 FOXL2NBQ6ZUU3 175 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 HAVCR2Q8TDQ0 301 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 C14orf119Q9NWQ9 140 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 FAM206AQ9NX38 181 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 WASF3Q9UPY6 502 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 ZZEF1O43149 2961 aa16.24■□□□□ 0.19
USP39-201ENST00000323701 TRBV5-7A0A0A0MS05 114 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 GPR171O14626 319 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 LMX1BO60663 402 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 EPXP11678 715 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 AZGP1P25311 298 aaKnown RBP16.23■□□□□ 0.19
USP39-201ENST00000323701 PDSS1Q5T2R2 415 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 CADM3Q8N126 398 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 DIRAS2Q96HU8 199 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 NELFAQ9H3P2 528 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 LDAHQ9H6V9 325 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 OR52A1Q9UKL2 312 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 RCE1Q9Y256 329 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 LOC110117498-PIK3R3F6TDL0 507 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 UPK1BO75841 260 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 MSR1P21757 451 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 STEAP3Q658P3 488 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 DEGS2Q6QHC5 323 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 STAC2Q6ZMT1 411 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.23■□□□□ 0.19
USP39-201ENST00000323701 TUSC5Q8IXB3 177 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 MEIOBQ8N635 442 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 DTX3Q8N9I9 347 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 DNAAF1Q8NEP3 725 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 OR5H6Q8NGV6 325 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 OR2AJ1Q8NGZ0 328 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 GPR148Q8TDV2 347 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 FBXO17Q96EF6 278 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 ZCCHC4Q9H5U6 513 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 MALT1Q9UDY8 824 aa16.23■□□□□ 0.19
USP39-201ENST00000323701 TRGV5A0A0B4J1U4 118 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 K7EM74 188 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 SLC43A1O75387 559 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 PDGFAP04085 211 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 SLC2A1P11166 492 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 PRKXP51817 358 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 CNIH2Q6PI25 160 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 ZNF433Q8N7K0 673 aaPredicted RBP16.22■□□□□ 0.19
USP39-201ENST00000323701 WDYHV1Q96HA8 205 aa16.22■□□□□ 0.19
USP39-201ENST00000323701 IGKV3D-15A0A087WSY6 115 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 A0A1B0GVC2 190 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 C5orf63A6NC05 138 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 A6NIN4 97 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 ACOT7O00154 380 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 ELK1P19419 428 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 MMP16P51512 607 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 LRRTM1Q86UE6 522 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 LYSMD2Q8IV50 215 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 SLC7A6Q92536 515 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 NKX3-1Q99801 234 aaPredicted RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 EXO5Q9H790 373 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 DDX28Q9NUL7 540 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 ZNF319Q9P2F9 582 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 NOTOA8MTQ0 251 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 SNRPBP14678 240 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 LSM6P62312 80 aaKnown RBP16.21■□□□□ 0.19
USP39-201ENST00000323701 P2RY14Q15391 338 aa16.21■□□□□ 0.19
USP39-201ENST00000323701 BCL2A1Q16548 175 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms