RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 OR4A16Q8NH70 328 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR5R1Q8NH85 324 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR2AE1Q8NHA4 323 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 FBXL18Q96ME1 805 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 MEIS2O14770 477 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 HBQ1P09105 142 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 C21orf33P30042 268 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF93P35789 620 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RPEL1Q2QD12 228 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TUSC1Q2TAM9 212 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 LGALS14Q8TCE9 139 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM106AQ96A25 262 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 C3orf30Q96M34 536 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 INPP5KQ9BT40 448 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 IER2Q9BTL4 223 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 KLRF1Q9NZS2 232 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ABCA3Q99758 1704 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PPP1R17O96001 155 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 HLA-DQA1P01909 254 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 GNG4P50150 75 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 FCRLAQ7L513 359 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CPOQ8IVL8 374 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PIM2Q9P1W9 311 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 LRRC3CA6NJW4 275 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 FZD9O00144 591 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PIRO00625 290 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 DUSP11O75319 330 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 T-ENOLP0DO92 83 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RPS18P62269 152 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 GLDNQ6ZMI3 551 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR5A1Q8NGJ0 315 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PHOSPHO1Q8TCT1 267 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 KCNE4Q8WWG9 221 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 C2orf50Q96LR7 162 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SPATC1LQ9H0A9 340 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 GPSM3Q9Y4H4 160 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ADAMTS4O75173 837 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CBR3O75828 277 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 EOMESO95936 686 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 HPP00738 406 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 IGHG1P01857 330 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CNN1P51911 297 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NFATC4Q14934 902 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SGCBQ16585 318 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM164Q5U3C3 297 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 AADACL2Q6P093 401 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 LCTLQ6UWM7 567 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR2M3Q8NG83 312 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RPL10LQ96L21 214 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NUDT22Q9BRQ3 303 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR52D1Q9H346 318 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR1A2Q9Y585 309 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF320A2RRD8 509 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD34CP0C6C1 535 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NPY1RP25929 384 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PCBP4P57723 403 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 IRF9Q00978 393 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF787Q6DD87 383 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TPRG1Q6ZUI0 275 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR4D6Q8NGJ1 314 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 FAM3DQ96BQ1 224 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PDLIM5Q96HC4 596 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF845Q96IR2 970 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 MIR1-1HGQ9H1L0 117 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SERTAD3Q9UJW9 196 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 GAPDHP04406 335 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ADRB2P07550 413 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NQO2P16083 231 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 DIO1P49895 249 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 GPM6BQ13491 265 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SSX1Q16384 188 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR2B11Q5JQS5 317 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 LCN10Q6JVE6 187 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 VITQ6UXI7 678 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 DLK2Q6UY11 383 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 HUS1BQ8NHY5 278 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 DMRTA2Q96SC8 542 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NSUN3Q9H649 340 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM184BQ9Y519 407 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NUP210LQ5VU65 1888 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 MTORP42345 2549 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 COL3A1P02461 1466 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 EDDM13A0A1B0GTR0 161 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 TCRBV5S4A2TA0A5A2 114 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 KLK3P07288 261 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RPS25P62851 125 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SIRPB2Q5JXA9 342 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MPTX1A8MV57 137 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CTDSP2O14595 271 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CTDSPLO15194 276 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MPPED1O15442 326 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PAPLNO95428 1278 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SEMA4FO95754 770 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 APBA3O96018 575 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms