RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 GGNBP1Q5YKI7 109 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ANKRD60Q9BZ19 345 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 POLDIP2Q9Y2S7 368 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SCGB1A1P11684 91 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SLC25A4P12235 298 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 NQO2P16083 231 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PMCHP20382 165 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ADRA1AP35348 466 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF628Q5EBL2 1059 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 MS4A18H0YCH9 400 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SHC1P29353 583 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 MS4A18Q3C1V0 323 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 VWA2Q5GFL6 755 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 RNASEKQ6P5S7 137 aaKnown RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 NKX6-2Q9C056 277 aaPredicted RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TRAPPC4Q9Y296 219 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 STRAPQ9Y3F4 350 aaKnown RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 REEP5Q00765 189 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SLIT3O75094 1523 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF320A2RRD8 509 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PMS2P2O95744 297 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 FBP1P09467 338 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 DPY19L2P2Q6ZN68 376 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ACOT7LQ6ZUV0 252 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ARHGEF17Q96PE2 2063 aaPredicted RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 IGHV3-20A0A0C4DH32 117 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TBXA2RP21731 343 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 S100A11P31949 105 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 CNN1P51911 297 aaKnown RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 STUMQ69YW2 141 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 LHFPL2Q6ZUX7 228 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 UBE3DQ7Z6J8 389 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM135Q86UB9 458 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM255BQ8WV15 326 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF2Q9BSG1 426 aaPredicted RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 COL3A1P02461 1466 aaPredicted RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 RFPL4AA6NLU0 287 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 RFPL4AL1F8VTS6 287 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PRLHRP49683 370 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 OR2B8PP59922 312 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 LSAMPQ13449 338 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SFTPA2Q8IWL1 248 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SFTPA1Q8IWL2 248 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 SLC46A1Q96NT5 459 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 GMLQ99445 158 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM59LQ9UK28 342 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 NTNG1Q9Y2I2 539 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PRSS21Q9Y6M0 314 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ARNTP27540 789 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 GFRALQ6UXV0 394 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PFN4Q8NHR9 129 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 RPL3LQ92901 407 aaKnown RBP10.43□□□□□ -0.74
PTPN4-201ENST00000263708 TAAR6Q96RI8 345 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 HRH3Q9Y5N1 445 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 NUMBLQ9Y6R0 609 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 XRCC2O43543 280 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ALOX5APP20292 161 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 PCBP3P57721 371 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 SPNS3Q6ZMD2 512 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 DHRS4Q9BTZ2 278 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 SOX15O60248 233 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 KCNAB1Q14722 419 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 GORASP2Q9H8Y8 452 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CTSCP53634 463 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 FBXL14Q8N1E6 418 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 OR2L13Q8N349 312 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 TMEM40Q8WWA1 233 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 TAS2R4Q9NYW5 299 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 SLC5A6Q9Y289 635 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 A0A087WV62 115 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CD40P25942 277 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 MRPS21P82921 87 aaKnown RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 GAMTQ14353 236 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF534Q76KX8 674 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 TEKQ02763 1124 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 SPCS2Q15005 226 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 MAML2Q8IZL2 1156 aaPredicted RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 LILRA2Q8N149 483 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 VAMP8Q9BV40 100 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 PSENENQ9NZ42 101 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 COA3Q9Y2R0 106 aaPredicted RBP10.42□□□□□ -0.74
PTPN4-201ENST00000263708 C3P01024 1663 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 IGHV3-15A0A0B4J1V0 119 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 ABCD3P28288 659 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 NPY5RQ15761 445 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 CLLU1OSQ5K130 101 aa10.42□□□□□ -0.74
PTPN4-201ENST00000263708 FDX2Q6P4F2 183 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms